Detailed information NTG0170262

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: KAB08_RS14465
• Genome accession: NZ_CP017656
• Coordinates: 3019335..3020339 (+)
• Length: 334 a.a.
• NCBI ID: WP_070469586.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain KAB08
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3014335..3025339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAB08_RS14455 (KAB08_02926)	-	3017295..3018635 (+)	1341	WP_000437078.1	deoxyguanosinetriphosphate triphosphohydrolase	-
KAB08_RS14460 (KAB08_02927)	ruvA	3018727..3019326 (+)	600	WP_000578660.1	Holliday junction branch migration protein RuvA	-
KAB08_RS14465 (KAB08_02928)	ruvB	3019335..3020339 (+)	1005	WP_070469586.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KAB08_RS14470 (KAB08_02929)	-	3020544..3021878 (+)	1335	WP_000276845.1	M20 family metallopeptidase	-
KAB08_RS14475 (KAB08_02930)	ybgC	3022089..3022496 (+)	408	WP_001273591.1	tol-pal system-associated acyl-CoA thioesterase	-
KAB08_RS14480 (KAB08_02931)	tolQ	3022520..3023218 (+)	699	WP_000224630.1	protein TolQ	-
KAB08_RS14485 (KAB08_02932)	tolR	3023218..3023670 (+)	453	WP_001007562.1	protein TolR	-
KAB08_RS14490 (KAB08_02933)	tolA	3023674..3025020 (+)	1347	WP_001039143.1	cell envelope integrity protein TolA	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36786.99 Da
• Isoelectric Point: 4.7265

>NTDB_id=170262 KAB08_RS14465 WP_070469586.1 3019335..3020339(+) (ruvB) [Acinetobacter baumannii strain KAB08]
MQDRLISGTEKPEDHFDQAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGPPGLGKTTLANIIAREMGGNL
KSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTR
AGLLTSPLRDRFGIVQRLEFYSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN
HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEPYLIQQGYVMRTARGRIATNQ
SYLQFGMTPPEPKN

Nucleotide

• Length: 1005 bp

>NTDB_id=170262 KAB08_RS14465 WP_070469586.1 3019335..3020339(+) (ruvB) [Acinetobacter baumannii strain KAB08]
ATGCAAGACCGTCTAATCAGTGGAACAGAAAAACCTGAAGATCATTTTGATCAGGCTATTCGACCGACGTCACTTGCCGA
TTATATCGGGCAACCAGTCGTACGCGAGCAAATGGAAATTTTCATCGGTGCGGCTCGTGGTCGTGGTGAGGCACTCGATC
ACACACTGATTTTCGGTCCACCGGGCTTAGGAAAAACTACGCTTGCCAATATTATTGCGCGTGAAATGGGTGGCAATCTC
AAATCCACTTCAGGGCCTGTTTTAGAGCGTGCGGGTGATTTGGCTGCAATGCTGACTAACCTTGAAGAAGGCGATGTTTT
ATTTATTGATGAGATTCATCGTCTTTCACCAGTGATTGAAGAAATCCTCTATCCAGCAATGGAAGATTACCAACTCGATA
TCATGATTGGTGAAGGCCCTGCTGCCCGTTCAATTAAACTAGATTTACCCCCTTTTACACTTGTTGCTGCGACCACACGT
GCCGGCTTACTCACCTCGCCTCTACGTGACCGTTTCGGTATTGTGCAACGTCTTGAATTCTATTCTGTAGAAGACTTAAC
TCACATCGTGTCACGATCTGCAAACCTCATGGATGTACCCATTACAGTTGAGGGTGCAGAAGAAGTTGCACGCCGTTCAC
GCGGAACACCGCGTATTGCCAATCGTTTATTACGCCGTGTACGTGACTATGCACAAGTAAAAGGTACAGGCGAAGTTAAC
CATGAAATGGCACAACGTGCGCTTGATATGCTTAATGTCGATAAAGCTGGTTTAGATACCTTAGACCGACGTTATTTAAG
TATGTTGTTAGAACGTTTTGATGGTGGACCTGCTGGTGTTGAAGCCCTTGCAGCTGCTATGGCTGAAGATAGCGGAACAC
TTGAAGATGTTATTGAACCTTATTTAATTCAGCAAGGTTATGTTATGCGTACTGCACGAGGTCGCATTGCAACCAACCAA
TCTTATTTGCAGTTTGGCATGACGCCACCTGAGCCTAAAAACTAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-322)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.006	99.102	0.575
ruvB	Synechocystis sp. PCC 6803	56.962	94.611	0.539
ruvB	Streptococcus pneumoniae TIGR4	55.799	95.509	0.533
ruvB	Streptococcus pneumoniae R6	55.799	95.509	0.533
ruvB	Streptococcus pneumoniae D39	55.799	95.509	0.533
ruvB	Helicobacter pylori 26695	54.934	91.018	0.5