Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   AXE83_RS08775 Genome accession   NZ_CP014264
Coordinates   1864334..1866301 (-) Length   655 a.a.
NCBI ID   WP_060956165.1    Uniprot ID   A0A0X8JZB0
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1859334..1871301
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS08760 (AXE83_08760) cps4B 1859731..1860462 (-) 732 WP_060956162.1 capsular polysaccharide biosynthesis protein Cps4B -
  AXE83_RS08765 (AXE83_08765) - 1860464..1861909 (-) 1446 WP_060956163.1 LCP family protein -
  AXE83_RS08770 (AXE83_08770) amiA3 1862215..1864173 (-) 1959 WP_060956164.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS08775 (AXE83_08775) amiA 1864334..1866301 (-) 1968 WP_060956165.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS08780 (AXE83_08780) - 1866479..1868089 (-) 1611 WP_060956166.1 alpha-glucosidase -
  AXE83_RS08785 (AXE83_08785) - 1868242..1869726 (+) 1485 WP_045762827.1 DUF1846 domain-containing protein -
  AXE83_RS11440 (AXE83_08790) - 1869906..1870181 (+) 276 WP_060956167.1 hypothetical protein -

Sequence

Protein


Download         Length: 655 a.a.        Molecular weight: 72551.09 Da        Isoelectric Point: 5.0023

>NTDB_id=170018 AXE83_RS08775 WP_060956165.1 1864334..1866301(-) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKSKKWLAVAGITMSAALLLAACGKTEKKADAPTTFSYVYAIDPTTLDYSVTSKSSTSDVIANLVDGLLENDKYGNLIPS
LAEDWSVSQDGLTYTYKLRKGVKWYTSEGEEYAEVKAQDFVTGLKHAADGKSDGLTLIQDSIKGLAEYVSGETNDFSTVG
VKAVDDYTVEYTLNKPESFWNSKVTTATMLPVNEEFLNSQGKDYGAAAPSGILYNGPYILKNFTSKSVIEYEKNPNYWDK
DNVKIDHVKLTFYDGSDQESLIRSFASGSYTTARLFPTSSSFDSTKKEYGDKIVYSPQEATSYYFTFNVNRQSYNKTAKT
DDAQKTSTKEALLNKNFRQAINFALDRHAYSAQMNGEEGADKIIRTSLVPYDYVQVGEKTFGELAQEQLVTYGDQWKDVA
LTDGKDTFYNPTKAKAAFEKAKSELQAKGVTFPIHLDIPVEQTDVIAVQQTNSLKQSVEAALGNENVVIDVLQMTDNEKM
SITSQAKVPSQKDYDLNGTGWGPDYQDPATYLNILDAKKGSALKHLGITKGKDPEVMAQVGLDEYKKLLDDAASETSDLN
KRYEKYAKAQAWVSDSSLLIPVASSGGSPTVSRTVPFTKAYSQVGIKGDPFVFKGLELQNDIVTTKEYEEALKKWQKEKL
ETNAKYQKELANHVK

Nucleotide


Download         Length: 1968 bp        

>NTDB_id=170018 AXE83_RS08775 WP_060956165.1 1864334..1866301(-) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAATCGAAAAAGTGGCTCGCAGTAGCAGGGATAACGATGAGCGCAGCTCTTCTTTTGGCGGCTTGTGGCAAGACTGA
GAAAAAAGCAGATGCTCCAACAACATTTTCGTATGTTTATGCTATTGATCCAACAACATTGGACTATAGCGTTACTAGTA
AAAGTTCAACATCAGATGTCATCGCCAACCTGGTCGACGGACTCTTGGAAAATGACAAATATGGAAACTTAATTCCATCG
CTTGCTGAAGACTGGTCTGTTTCACAAGACGGTTTGACTTACACATACAAGCTACGTAAAGGTGTCAAATGGTATACTTC
TGAAGGAGAAGAGTATGCTGAAGTCAAGGCCCAAGACTTTGTGACTGGTTTGAAACATGCTGCAGATGGTAAATCAGATG
GCCTAACACTTATCCAAGACTCCATCAAAGGATTGGCAGAGTACGTTAGCGGTGAAACGAATGACTTCTCAACAGTCGGT
GTCAAAGCAGTTGATGACTATACGGTTGAGTATACCTTGAACAAACCAGAAAGCTTCTGGAATTCTAAGGTAACAACAGC
AACCATGCTCCCAGTTAATGAAGAATTCTTAAATTCTCAAGGGAAAGATTACGGTGCAGCAGCGCCTTCAGGTATTCTCT
ACAATGGTCCTTATATTTTGAAGAACTTCACTTCGAAATCCGTGATCGAGTACGAAAAGAACCCGAATTACTGGGACAAG
GACAATGTTAAGATTGACCACGTCAAGCTTACTTTCTACGACGGCTCTGACCAAGAATCATTGATTCGTAGCTTTGCGTC
AGGCTCATATACGACAGCTCGCCTCTTCCCAACTAGCTCAAGCTTTGATTCAACTAAGAAAGAATACGGCGATAAGATCG
TTTATAGTCCACAAGAAGCCACTAGCTATTACTTTACTTTTAACGTAAATCGTCAGTCTTACAATAAAACAGCTAAGACA
GATGATGCCCAAAAAACATCAACTAAAGAAGCGCTTCTCAATAAAAACTTCCGTCAAGCCATCAACTTCGCTCTTGACCG
TCATGCTTACTCTGCACAGATGAATGGCGAAGAAGGTGCAGACAAGATTATCCGTACCAGCCTTGTGCCTTATGACTATG
TTCAGGTTGGTGAAAAGACCTTCGGAGAATTGGCTCAAGAACAATTGGTAACATACGGAGACCAGTGGAAGGATGTAGCT
TTGACAGATGGTAAAGATACCTTTTACAATCCAACAAAAGCAAAAGCCGCCTTTGAAAAAGCAAAATCAGAATTGCAAGC
TAAAGGTGTAACCTTCCCAATCCATTTGGATATTCCAGTTGAACAGACAGATGTCATTGCTGTACAGCAGACCAACTCCC
TCAAACAGTCTGTCGAAGCAGCACTTGGAAATGAAAATGTTGTCATCGATGTACTTCAAATGACTGACAATGAGAAAATG
AGCATTACATCTCAAGCTAAAGTTCCTTCTCAAAAAGACTATGACTTGAACGGAACTGGTTGGGGGCCAGACTATCAAGA
CCCGGCAACCTATCTCAATATCCTAGATGCTAAGAAGGGTTCTGCCCTTAAACACTTGGGTATCACAAAAGGAAAAGATC
CAGAAGTCATGGCTCAAGTTGGACTTGATGAGTACAAGAAACTCTTGGATGATGCAGCATCAGAAACGAGCGATCTCAAC
AAACGCTATGAAAAATATGCCAAAGCCCAAGCATGGGTTTCAGATAGCTCGCTCCTTATCCCTGTAGCATCTTCAGGTGG
TTCTCCGACAGTTAGTCGTACAGTGCCATTTACAAAAGCATACTCTCAAGTTGGTATCAAGGGTGATCCATTTGTATTCA
AAGGCTTAGAGTTGCAAAACGATATTGTAACCACTAAAGAATACGAAGAAGCTCTCAAGAAATGGCAAAAAGAGAAACTT
GAAACAAATGCCAAATACCAAAAAGAACTAGCAAATCACGTTAAATAG

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(77-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JZB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

54.559

100

0.548
  amiA3 Streptococcus thermophilus LMD-9

53.414

100

0.537
  amiA3 Streptococcus thermophilus LMG 18311

52.959

100

0.533

Multiple sequence alignment