Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   AXE83_RS08770 Genome accession   NZ_CP014264
Coordinates   1862215..1864173 (-) Length   652 a.a.
NCBI ID   WP_060956164.1    Uniprot ID   -
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1857215..1869173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS08750 (AXE83_08750) - 1858336..1859019 (-) 684 WP_060956160.1 tyrosine-protein kinase -
  AXE83_RS08755 (AXE83_08755) - 1859030..1859722 (-) 693 WP_060956161.1 Wzz/FepE/Etk N-terminal domain-containing protein -
  AXE83_RS08760 (AXE83_08760) cps4B 1859731..1860462 (-) 732 WP_060956162.1 capsular polysaccharide biosynthesis protein Cps4B -
  AXE83_RS08765 (AXE83_08765) - 1860464..1861909 (-) 1446 WP_060956163.1 LCP family protein -
  AXE83_RS08770 (AXE83_08770) amiA3 1862215..1864173 (-) 1959 WP_060956164.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS08775 (AXE83_08775) amiA 1864334..1866301 (-) 1968 WP_060956165.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS08780 (AXE83_08780) - 1866479..1868089 (-) 1611 WP_060956166.1 alpha-glucosidase -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72512.37 Da        Isoelectric Point: 4.7773

>NTDB_id=170017 AXE83_RS08770 WP_060956164.1 1862215..1864173(-) (amiA3) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKLKKRLIGAGLTLAAAVLLTACGKSASDAKTYSSTFGADPTTFNYLLDYSGDNTAVVTNLVDGLLENDNYGNLIPALAE
DWSVSKDGLTYTYKLRQDAKWFTADGEEYAPIKAQDFVTGIKYAADNKSQALDLIQNSIKGLDDYVTGANTDFSNVGVKA
LDDYTVQYTLTRPEPFWNSKTTNSILFPVNEEFLTSKGKEFGELKADSILYSGPYLLKEFTSKSSLEYKKNPHYYDQEKV
TIERVKLAYVDGSDQDMTIRNFESGAYSSAGVYPNSSNFAKTKEKYKDNIVYSLQDATSWYYNFNVNRQAYNHTAKTSDE
QKQATQAAILNKNFRQAINFAIDRTAYSAQSNGEEAAKNTLRNTLVPPTFVQVGDKTFGETVSSKLVNYGTQWSNMNLED
AQDGYFNKEKAQAQFAEAKKELEAQGVTFPIHLDLPVDQVNKTLLPKIHSLKQSVESTLGAENVVIDVIQISTEDYANAT
FQAPTTADHDYDLNLDGWSADYQDPSTYLNPFNAEDGFYLKILGLDPSKDTDKITSIGLDQYTQKLKAADAENTDVAKRY
ENYADAQAWLIDSSLLLPVNSNGGGASVTRVTPFTRAYSLVGIKGTGSNYKYMRLQTDVVTSSQFAEAKAKWEQERKNSV
EKSQKDFESHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=170017 AXE83_RS08770 WP_060956164.1 1862215..1864173(-) (amiA3) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAACTTAAAAAACGTTTGATTGGAGCGGGGTTGACACTTGCTGCTGCGGTCTTGTTGACAGCGTGTGGGAAGTCAGC
ATCAGACGCTAAAACCTACTCGTCAACATTTGGTGCCGATCCAACAACCTTCAACTACCTTTTGGACTATTCAGGAGATA
ACACTGCTGTTGTAACCAACTTGGTAGATGGTTTGCTTGAAAATGACAATTATGGAAATCTCATTCCTGCTCTTGCAGAA
GATTGGAGTGTTTCAAAGGATGGCTTGACTTACACTTATAAACTTCGTCAAGATGCTAAATGGTTCACGGCTGATGGGGA
AGAATACGCCCCAATTAAAGCACAAGATTTCGTCACAGGTATCAAGTATGCAGCTGATAACAAGAGTCAAGCGCTTGATT
TGATTCAAAACTCAATCAAGGGATTAGATGATTATGTGACAGGTGCAAATACTGACTTTTCAAATGTTGGAGTCAAAGCC
TTGGATGACTATACTGTCCAATATACCTTGACACGACCAGAACCATTCTGGAACTCTAAGACTACCAATAGTATCTTGTT
CCCAGTGAATGAAGAATTCTTGACTTCTAAAGGTAAAGAATTTGGAGAGTTGAAAGCAGATAGTATTCTTTATAGCGGTC
CTTATTTGTTAAAAGAATTTACATCAAAATCATCACTCGAGTACAAGAAGAATCCTCATTACTATGACCAAGAAAAAGTA
ACGATTGAAAGAGTTAAATTGGCCTATGTTGATGGTTCTGACCAAGATATGACGATTCGTAACTTTGAAAGTGGTGCTTA
CTCATCTGCAGGAGTCTATCCAAATAGCTCAAACTTTGCAAAGACTAAGGAAAAATATAAGGACAACATCGTCTATAGCT
TGCAGGACGCAACTTCTTGGTACTATAATTTTAACGTTAACCGCCAAGCATACAATCATACAGCTAAGACTAGCGATGAG
CAAAAACAAGCGACCCAAGCTGCGATTTTAAATAAAAACTTCCGTCAAGCCATCAACTTTGCAATTGACCGTACAGCCTA
CTCGGCTCAGTCTAATGGAGAGGAAGCTGCAAAAAACACTCTTCGTAACACACTTGTGCCACCAACTTTCGTGCAAGTTG
GAGATAAGACCTTTGGTGAGACAGTTTCATCTAAGTTGGTAAACTACGGTACACAGTGGTCAAACATGAATCTTGAAGAC
GCTCAAGACGGCTACTTCAATAAAGAAAAAGCACAAGCTCAGTTTGCAGAGGCTAAAAAAGAACTAGAAGCACAAGGTGT
AACCTTCCCGATTCATTTGGACTTGCCTGTAGACCAAGTTAACAAAACCTTGCTTCCAAAGATTCATTCGCTTAAACAAT
CTGTCGAATCAACTCTTGGGGCAGAAAATGTAGTGATTGATGTAATTCAAATTTCAACAGAAGACTATGCCAATGCGACA
TTCCAAGCGCCAACCACAGCTGATCATGACTATGATTTGAACTTGGATGGTTGGTCTGCAGACTACCAAGATCCATCAAC
TTATCTTAATCCTTTCAACGCTGAGGATGGATTCTATCTCAAGATTTTAGGACTTGATCCAAGCAAGGATACGGATAAGA
TTACCAGTATTGGATTGGACCAGTATACTCAAAAATTGAAAGCAGCAGATGCAGAAAATACAGACGTAGCCAAACGCTAT
GAAAACTATGCAGATGCACAAGCCTGGTTGATTGATAGTTCGCTATTGCTCCCTGTAAATTCAAACGGTGGTGGGGCTTC
AGTGACACGTGTTACACCATTTACACGAGCTTACTCATTAGTTGGTATCAAAGGAACTGGAAGCAACTACAAGTACATGA
GATTGCAGACAGATGTCGTTACAAGTTCTCAATTTGCTGAAGCCAAGGCTAAATGGGAACAAGAACGTAAAAATTCTGTC
GAAAAGAGTCAAAAAGACTTTGAAAGCCACGTGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(74-517)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

51.368

100

0.518
  amiA3 Streptococcus thermophilus LMG 18311

50.912

100

0.514
  amiA Streptococcus salivarius strain HSISS4

50.989

100

0.514

Multiple sequence alignment