Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   AXE83_RS07610 Genome accession   NZ_CP014264
Coordinates   1614812..1616770 (-) Length   652 a.a.
NCBI ID   WP_060956013.1    Uniprot ID   A0A0X8JYY6
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1609812..1621770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS07600 (AXE83_07600) - 1612401..1613567 (-) 1167 WP_060956011.1 MalY/PatB family protein -
  AXE83_RS07605 (AXE83_07605) - 1613572..1614666 (-) 1095 WP_060956012.1 cystathionine gamma-synthase -
  AXE83_RS07610 (AXE83_07610) amiA 1614812..1616770 (-) 1959 WP_060956013.1 peptide ABC transporter substrate-binding protein Regulator
  AXE83_RS07615 (AXE83_07615) - 1616960..1618582 (-) 1623 WP_060956014.1 polysaccharide biosynthesis protein -
  AXE83_RS07620 (AXE83_07620) - 1618686..1620131 (+) 1446 WP_060956015.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  AXE83_RS07625 (AXE83_07625) - 1620173..1620820 (-) 648 WP_060956016.1 DUF1803 domain-containing protein -
  AXE83_RS07630 (AXE83_07630) - 1620804..1621316 (-) 513 WP_060956017.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72744.82 Da        Isoelectric Point: 4.7016

>NTDB_id=170010 AXE83_RS07610 WP_060956013.1 1614812..1616770(-) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKKSKAKYLTLAGLALSAGLLLAACSNSASSTKTYNYVYSSDPSSLNYLAENRATTNDIVTNLVDGLMENDQYGNYVPSL
AEDWTVSQDGLTYTYKLRKDAKWYTSEGEEYAPVTAQDFVTGLKYAADKKSEALYLVQDSVAGLDDYINGKTTDFSTVGV
KAIDDQTVQYTLTRPESYWNSKTTSTILFPVNADFLKSKGDDFGKVDPSSILYNGPFLMKSFVSKSVIEFKKNPNYWDEK
NVFVDDVKLAYYDGSDQDALARNFVEGVYSYARLYPNSSSFEGIKEKNKDNIIYSMQNATSYYLNFNLDRKSYNFTSKSS
DIEKKSTQEAVLNKNFRQAFNYAYNRTAYGAQSQGEDGATKIIRNLVVPPTFVSINGKDFGDVVSEKMVNYGQEWQGINF
ADAQDPYYNPDKAKAKFAEAKKELEAKGVQFPIHLDVTVDQSAKKGVLEASSLKQSIESVLGAENVVIDIQQLSTDDYDN
SGYLAQTAAQKDFDIYNGGWSADYLDPSSYLDILNVNNGGMLQNIGLEPGEVNDKAKEVGLDTYTQMLEEANKEQDPAKR
YEKYAEVQAWLVDSALAIPNVSQGGTPTLRKTVPFSSPFSQAGNKGVESYKYLKLQDKTVTADEYEKAKEKWLKEKEASN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=170010 AXE83_RS07610 WP_060956013.1 1614812..1616770(-) (amiA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAAAAGTCTAAGGCAAAATATCTGACGCTAGCAGGCCTTGCCCTAAGTGCCGGTCTACTATTGGCGGCTTGTAGCAA
CTCAGCTAGTTCAACTAAAACATACAACTATGTCTATTCTAGCGATCCGTCTAGTTTGAACTATCTTGCAGAAAACCGTG
CAACAACCAATGACATCGTTACCAATTTGGTAGATGGGTTGATGGAAAATGACCAATACGGTAACTACGTTCCATCCTTG
GCAGAAGATTGGACTGTTTCTCAGGACGGTTTGACATACACTTATAAACTTCGTAAAGATGCTAAGTGGTATACCTCTGA
AGGTGAAGAATATGCTCCAGTAACTGCCCAAGATTTTGTAACTGGTTTGAAATATGCTGCTGATAAAAAATCCGAAGCTT
TGTACCTGGTTCAAGATTCTGTAGCAGGTTTGGATGACTATATCAACGGGAAAACAACTGACTTTTCAACTGTCGGTGTT
AAGGCGATTGACGACCAAACAGTTCAGTACACTTTGACACGACCAGAATCTTATTGGAATTCTAAAACAACATCAACCAT
TCTCTTCCCTGTCAATGCAGACTTCCTGAAATCAAAAGGGGATGATTTTGGTAAGGTAGACCCTTCTAGTATTTTGTACA
ATGGACCTTTCTTAATGAAATCTTTTGTTTCAAAATCTGTTATCGAATTCAAGAAAAATCCCAACTACTGGGATGAAAAA
AATGTCTTTGTGGATGATGTGAAATTGGCCTATTATGATGGTAGTGACCAAGATGCACTAGCACGTAACTTTGTAGAAGG
AGTCTATAGCTACGCGCGTCTCTATCCAAATAGCTCAAGCTTTGAAGGAATTAAAGAGAAGAACAAGGATAACATCATCT
ATAGTATGCAAAATGCAACTTCTTATTACTTGAACTTCAACTTGGACAGAAAATCTTATAACTTCACGTCTAAGTCCTCA
GATATCGAAAAGAAATCAACCCAAGAAGCAGTTCTGAATAAAAACTTCCGTCAAGCCTTCAACTATGCATACAACCGTAC
AGCCTATGGAGCACAATCTCAAGGGGAGGACGGAGCAACGAAGATTATTCGTAACCTAGTTGTACCTCCAACATTTGTAA
GTATCAACGGAAAAGACTTTGGCGATGTTGTTTCAGAAAAGATGGTCAACTATGGCCAAGAATGGCAAGGAATCAACTTT
GCAGATGCGCAAGACCCATACTACAATCCTGACAAGGCTAAGGCTAAATTTGCGGAAGCCAAGAAAGAATTGGAAGCTAA
GGGTGTGCAATTCCCAATCCACTTGGATGTAACAGTTGACCAATCAGCTAAAAAAGGTGTACTTGAAGCAAGCTCTTTGA
AACAATCCATCGAATCTGTTCTAGGAGCTGAGAATGTGGTGATTGATATCCAACAATTATCAACAGACGATTACGATAAT
TCTGGCTACCTCGCTCAAACTGCAGCCCAAAAAGACTTTGATATCTATAATGGTGGTTGGAGTGCAGACTACTTAGATCC
GTCAAGCTATCTTGATATCTTAAATGTCAATAACGGTGGTATGTTGCAAAACATTGGTCTAGAACCAGGTGAGGTCAATG
ACAAGGCTAAGGAAGTTGGTCTGGATACTTACACTCAAATGTTGGAAGAAGCGAACAAGGAGCAAGATCCAGCAAAACGT
TATGAAAAATATGCTGAAGTTCAAGCTTGGCTCGTTGATAGCGCCCTTGCTATTCCAAACGTTTCTCAAGGTGGAACACC
GACCTTGAGAAAGACAGTTCCATTCTCATCGCCATTCTCACAAGCTGGAAATAAGGGTGTCGAATCATACAAATATCTCA
AGTTGCAAGATAAAACTGTAACGGCTGATGAGTATGAAAAAGCTAAAGAAAAATGGTTAAAAGAAAAAGAAGCATCTAAT
AAAAAAGCCCAAGAAGAATTAGCAAAACATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8JYY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

57.295

100

0.578
  amiA3 Streptococcus thermophilus LMG 18311

56.753

100

0.574
  amiA3 Streptococcus thermophilus LMD-9

56.449

100

0.571

Multiple sequence alignment