Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   AXE83_RS02455 Genome accession   NZ_CP014264
Coordinates   520247..521296 (+) Length   349 a.a.
NCBI ID   WP_060955290.1    Uniprot ID   A0A0X8JX86
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 515247..526296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS02425 (AXE83_02425) - 515838..516470 (+) 633 WP_060955285.1 DJ-1/PfpI family protein -
  AXE83_RS02430 (AXE83_02430) dnaJ 516670..517806 (+) 1137 WP_060955286.1 molecular chaperone DnaJ -
  AXE83_RS02435 (AXE83_02435) - 518006..518659 (-) 654 WP_083500974.1 hypothetical protein -
  AXE83_RS02440 (AXE83_02440) - 518744..519031 (-) 288 WP_045763640.1 hypothetical protein -
  AXE83_RS02445 (AXE83_02445) - 519041..519451 (-) 411 WP_060955288.1 HIT family protein -
  AXE83_RS02450 (AXE83_02450) pptA 519519..520250 (+) 732 WP_060955289.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS02455 (AXE83_02455) pptB 520247..521296 (+) 1050 WP_060955290.1 ABC transporter permease Regulator
  AXE83_RS02460 (AXE83_02460) - 521453..521782 (-) 330 WP_060955291.1 hypothetical protein -
  AXE83_RS02465 (AXE83_02465) - 522063..522401 (+) 339 WP_049504297.1 LytTR family DNA-binding domain-containing protein -
  AXE83_RS02470 (AXE83_02470) comE/blpR 522406..523143 (+) 738 WP_060955292.1 LytTR family DNA-binding domain-containing protein Regulator
  AXE83_RS02475 (AXE83_02475) - 523157..524506 (+) 1350 WP_060955293.1 sensor histidine kinase -
  AXE83_RS02480 (AXE83_02480) - 524608..524964 (+) 357 WP_060955294.1 hypothetical protein -
  AXE83_RS10930 - 525162..525314 (+) 153 WP_148130295.1 hypothetical protein -
  AXE83_RS02485 (AXE83_02485) - 525311..525715 (+) 405 WP_060955295.1 hypothetical protein -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 40275.30 Da        Isoelectric Point: 10.0988

>NTDB_id=169984 AXE83_RS02455 WP_060955290.1 520247..521296(+) (pptB) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MKELFLKRKQAFRKECVGYLRYVLNDHFVLFLLVLVGFLAYQYSQLLQHFPENHLPILGLIGIVSVLLLLWGGIATYVEA
PDKLFLLVAEEEVREHIQKQSLVSFIFWVSVQTLFLLLFAPLFLAMGLGLGVFWVYVLLLGVGKYFLFQKKAGKFFSANH
LDWDYVIAQESKRKQFLLRFFALFTQVKGISNSVKRRAYLDVILKAVQKVPSKIWQNLYLRSYLRNGDLFALSLRLLFLS
LLALIFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLDKGQKERGLQAVVRGLTGFVLLVQLVVGVITLQE
KLALLALLGAGLVLHILYLPYQVKRQMQD

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=169984 AXE83_RS02455 WP_060955290.1 520247..521296(+) (pptB) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAAAGAGTTGTTTCTAAAGCGAAAGCAGGCTTTTCGTAAAGAGTGTGTCGGTTATCTGCGTTATGTGCTCAATGACCA
CTTTGTCTTGTTTTTACTGGTCTTAGTAGGTTTTCTAGCCTATCAGTATAGTCAACTGCTCCAGCATTTTCCTGAGAATC
ATCTACCAATCCTAGGTTTAATTGGGATTGTCTCTGTTTTACTCTTACTTTGGGGAGGAATAGCGACCTATGTGGAAGCG
CCTGATAAGCTCTTTCTCTTAGTAGCTGAAGAAGAAGTGAGAGAACACATCCAGAAGCAAAGTTTAGTTTCCTTCATCTT
TTGGGTTAGTGTACAGACTCTCTTTTTGCTCCTTTTTGCTCCTTTATTTTTAGCCATGGGCTTAGGCTTAGGAGTTTTTT
GGGTCTATGTTCTTCTTTTGGGAGTCGGGAAATATTTCCTGTTTCAGAAAAAAGCTGGCAAGTTTTTTAGTGCAAATCAT
CTGGACTGGGACTATGTGATTGCCCAAGAAAGTAAACGCAAGCAGTTTTTACTTCGTTTCTTTGCCCTCTTTACCCAAGT
CAAGGGAATTTCAAACAGCGTCAAGAGACGAGCTTATCTAGATGTTATCCTAAAAGCAGTTCAGAAGGTGCCGAGCAAGA
TTTGGCAGAACCTCTATCTTCGTTCTTATCTGCGAAATGGAGATCTTTTTGCCCTCAGTCTTCGTCTCCTCTTCCTATCC
TTGCTGGCGTTGATCTTTATTGAGCAAGCTTGGATAGCGACAGCAGTGGTGGTTCTATTTAACTACCTCTTGCTCTTTCA
GTTATTGGCCCTCTATCACGCCTTTGATTACCAATATTTGACTCAACTTTTCCCGCTAGACAAGGGGCAAAAGGAAAGGG
GATTACAGGCGGTTGTCCGAGGATTGACTGGTTTTGTTTTATTGGTTCAACTGGTAGTTGGGGTGATTACCCTCCAAGAA
AAACTAGCTCTTTTAGCCCTGCTTGGAGCTGGATTGGTCTTACACATCTTGTATCTCCCTTATCAGGTGAAACGTCAGAT
GCAGGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0X8JX86

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

48.138

100

0.481

  pptB Streptococcus thermophilus LMD-9

46.552

99.713

0.464


Multiple sequence alignment