Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   AXE83_RS02470 Genome accession   NZ_CP014264
Coordinates   522406..523143 (+) Length   245 a.a.
NCBI ID   WP_060955292.1    Uniprot ID   A0A0X8JX24
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 517406..528143
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS02435 (AXE83_02435) - 518006..518659 (-) 654 WP_083500974.1 hypothetical protein -
  AXE83_RS02440 (AXE83_02440) - 518744..519031 (-) 288 WP_045763640.1 hypothetical protein -
  AXE83_RS02445 (AXE83_02445) - 519041..519451 (-) 411 WP_060955288.1 HIT family protein -
  AXE83_RS02450 (AXE83_02450) pptA 519519..520250 (+) 732 WP_060955289.1 ABC transporter ATP-binding protein Regulator
  AXE83_RS02455 (AXE83_02455) pptB 520247..521296 (+) 1050 WP_060955290.1 ABC transporter permease Regulator
  AXE83_RS02460 (AXE83_02460) - 521453..521782 (-) 330 WP_060955291.1 hypothetical protein -
  AXE83_RS02465 (AXE83_02465) - 522063..522401 (+) 339 WP_049504297.1 LytTR family DNA-binding domain-containing protein -
  AXE83_RS02470 (AXE83_02470) comE/blpR 522406..523143 (+) 738 WP_060955292.1 LytTR family DNA-binding domain-containing protein Regulator
  AXE83_RS02475 (AXE83_02475) - 523157..524506 (+) 1350 WP_060955293.1 sensor histidine kinase -
  AXE83_RS02480 (AXE83_02480) - 524608..524964 (+) 357 WP_060955294.1 hypothetical protein -
  AXE83_RS10930 - 525162..525314 (+) 153 WP_148130295.1 hypothetical protein -
  AXE83_RS02485 (AXE83_02485) - 525311..525715 (+) 405 WP_060955295.1 hypothetical protein -
  AXE83_RS02490 (AXE83_02490) - 526218..526820 (+) 603 WP_060955296.1 type II CAAX endopeptidase family protein -
  AXE83_RS02500 (AXE83_02500) - 527150..527461 (+) 312 WP_060955298.1 hypothetical protein -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28750.00 Da        Isoelectric Point: 6.5015

>NTDB_id=169985 AXE83_RS02470 WP_060955292.1 522406..523143(+) (comE/blpR) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MRIFVLEDDFSQQARIETTIEKLLKKQSIIPSSFEVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIRDRD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALIYANSQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSPRPHRVILYTKTDRLEFTASLEEVLKQEPRLLQCHRSFLINPTNVVRLDKKEKLLFFPNGGSCLIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=169985 AXE83_RS02470 WP_060955292.1 522406..523143(+) (comE/blpR) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAGAATATTTGTTTTAGAAGATGATTTTTCCCAACAAGCTAGGATTGAAACGACGATTGAAAAACTTTTGAAAAAACA
GAGTATCATCCCCAGTTCTTTTGAAGTCTTTGGCAAGCCAGACCAACTGCTGGCAGAGGTGCATGAAAAGGGGGCGCATC
AGCTTTTCTTTTTGGACATTGAGATTCGAAATGAAGAGATGAAGGGGCTAGAAGTGGCTAGAAAGATTCGGGATCGGGAT
CCTTATGCCCTGATCGTCTTTGTGACGACTCACTCAGAGTTTATGCCCCTGTCCTTTCGCTACCAAGTGTCTGCTTTGGA
CTACATTGATAAGGCCTTATCGGCAGAGGAGTTTGAATCTCGGATCGAGACAGCCCTTATCTATGCCAATAGTCAAGATA
GTAAAAGTTTGGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCTCAATTCCAGTATCCCTTTAAAGAGGTTTACTAT
CTCGAAACGTCCCCAAGACCCCATCGTGTTATTCTCTATACCAAGACGGACAGGCTGGAATTTACGGCGAGTTTAGAGGA
GGTTCTCAAGCAGGAGCCCCGTCTCTTGCAGTGCCATCGCTCTTTTCTTATCAATCCAACTAATGTAGTTCGTTTGGATA
AGAAAGAAAAACTGCTTTTCTTTCCCAATGGTGGAAGTTGTCTAATCGCCCGTTATAAGGTCAGGGAAGTATCTGAGGCT
ATCAATAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0X8JX24

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

53.909

99.184

0.535

  comE/comE1 Streptococcus equinus JB1

43.038

96.735

0.416

  comE/comE2 Streptococcus equinus JB1

38.843

98.776

0.384


Multiple sequence alignment