Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   AXE83_RS02270 Genome accession   NZ_CP014264
Coordinates   464553..465560 (+) Length   335 a.a.
NCBI ID   WP_049503580.1    Uniprot ID   -
Organism   Streptococcus sp. oral taxon 431 strain F0610 (5-114)     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 459553..470560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE83_RS02245 (AXE83_02245) - 459871..461169 (+) 1299 WP_060955262.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  AXE83_RS02250 (AXE83_02250) folE 461171..461725 (+) 555 WP_000380927.1 GTP cyclohydrolase I FolE -
  AXE83_RS02255 (AXE83_02255) folK 461884..462705 (+) 822 WP_060955263.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  AXE83_RS02260 (AXE83_02260) - 462698..463981 (+) 1284 WP_060955264.1 hypothetical protein -
  AXE83_RS02265 (AXE83_02265) - 464030..464347 (-) 318 WP_060955265.1 DUF960 domain-containing protein -
  AXE83_RS02270 (AXE83_02270) ccpA 464553..465560 (+) 1008 WP_049503580.1 catabolite control protein A Regulator
  AXE83_RS02275 (AXE83_02275) - 465967..466929 (-) 963 WP_060955266.1 asparaginase -
  AXE83_RS02280 (AXE83_02280) - 466995..468386 (+) 1392 WP_060955267.1 Cof-type HAD-IIB family hydrolase -
  AXE83_RS02285 (AXE83_02285) - 468503..468955 (-) 453 WP_049504821.1 universal stress protein -
  AXE83_RS02290 (AXE83_02290) - 469101..469940 (+) 840 WP_060956356.1 metallophosphoesterase family protein -
  AXE83_RS02295 (AXE83_02295) - 470012..470449 (+) 438 WP_060955268.1 Rrf2 family transcriptional regulator -

Sequence


Protein


Download         Length: 335 a.a.        Molecular weight: 37157.23 Da        Isoelectric Point: 5.9489

>NTDB_id=169982 AXE83_RS02270 WP_049503580.1 464553..465560(+) (ccpA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPDITNTYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGVIFMGYHLTEKIRSEFSRSRTPVVLAGTVDIEHQLPS
VNIDYKHATVDAVRHLLKRNKKIAFVSGPLVDDINGKIRLAGYKDALKEAGINYSEGLVFESKYRYDDGYALAERLISSK
ATAAIVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQIARYTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLVERHSTRKD

Nucleotide


Download         Length: 1008 bp        

>NTDB_id=169982 AXE83_RS02270 WP_049503580.1 464553..465560(+) (ccpA) [Streptococcus sp. oral taxon 431 strain F0610 (5-114)]
ATGAACACAGATGATACAGTAACAATTTATGACGTTGCCCGAGAAGCGGGAGTGTCAATGGCAACTGTCAGTCGTGTTGT
CAATGGCAATAAGAACGTCAAAGAAAACACCCGTAAAAAAGTCCTAGAGGTCATTGATCGTCTTGACTACCGCCCTAATG
CAGTAGCTCGTGGTCTAGCAAGCAAGAAAACAACAACAGTTGGAGTTGTTATTCCAGATATCACAAACACTTATTTCTCT
ACCCTTGCTAAGGGGATTGACGATATCGCGGAAATGTACAAATACAACATCGTCCTTGCTAACAGTGATGAGGATGATGA
AAAGGAAGTATCTGTGGTCAATACTCTCTTTTCTAAACAGGTGGATGGCGTTATCTTCATGGGTTATCATTTAACTGAGA
AGATTCGCTCAGAGTTTTCACGCTCACGCACACCTGTGGTTCTTGCAGGAACAGTTGACATAGAACACCAACTTCCAAGT
GTCAATATTGACTATAAACATGCTACTGTTGATGCAGTCCGCCATCTCTTGAAACGAAATAAAAAAATTGCCTTCGTTAG
TGGACCATTAGTGGATGATATTAATGGCAAGATTCGCTTAGCTGGTTACAAAGATGCTTTGAAAGAAGCGGGTATTAACT
ACAGTGAAGGTCTTGTTTTTGAATCAAAATACCGTTATGATGATGGTTATGCCTTGGCAGAACGCTTGATTTCTTCTAAA
GCAACAGCAGCGATTGTAACAGGTGATGAATTAGCGGCAGGTGTTTTGAACGGACTTGCTGACAAGGGAGTTTCTGTACC
GGAAGACTTTGAAATTATCACCAGTGATGATTCACAAATCGCGCGCTATACTCGTCCAAACCTAACCACCATTGCGCAAC
CTTTGTATGATCTTGGTGCTATTAGTATGCGTATGTTGACGAAGATTATGCATAAGGAAGAGTTAGAAGAGCGTGAAGTT
CTTTTGCCACATGGTTTGGTAGAACGTCATTCAACTCGTAAAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

90.419

99.701

0.901

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.623

99.701

0.884

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.308

98.806

0.576


Multiple sequence alignment