Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AXF37_RS04725 | Genome accession | NZ_CP014257 |
| Coordinates | 1030858..1031457 (+) | Length | 199 a.a. |
| NCBI ID | WP_027221266.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pascullei strain D-7119 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1025858..1036457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF37_RS04710 (AXF37_04710) | - | 1027796..1028809 (-) | 1014 | WP_027221263.1 | hypothetical protein | - |
| AXF37_RS04715 (AXF37_04715) | pilM | 1029228..1030292 (+) | 1065 | WP_027221264.1 | pilus assembly protein PilM | Machinery gene |
| AXF37_RS04720 (AXF37_04720) | pilN | 1030296..1030844 (+) | 549 | WP_027221265.1 | PilN domain-containing protein | Machinery gene |
| AXF37_RS04725 (AXF37_04725) | pilO | 1030858..1031457 (+) | 600 | WP_027221266.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AXF37_RS04730 (AXF37_04730) | pilP | 1031454..1032038 (+) | 585 | WP_027221267.1 | pilus assembly protein PilP | Machinery gene |
| AXF37_RS04735 (AXF37_04735) | pilQ | 1032042..1034138 (+) | 2097 | WP_027221268.1 | type IV pilus secretin PilQ | Machinery gene |
| AXF37_RS04740 (AXF37_04740) | aroK | 1034581..1035108 (+) | 528 | WP_032828804.1 | shikimate kinase AroK | - |
| AXF37_RS04745 (AXF37_04745) | aroB | 1035095..1036198 (+) | 1104 | WP_027221270.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22441.13 Da Isoelectric Point: 5.3305
>NTDB_id=169855 AXF37_RS04725 WP_027221266.1 1030858..1031457(+) (pilO) [Legionella pneumophila subsp. pascullei strain D-7119]
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
MDTVNLSELTLENVGQWPMPVKIGVILGISILIIGLGYWLIVKPNFEQLDTLEAQEIALKTEFEKKQHQAANLQAYRNQL
QLMNERFGTMLKQLPAKNEMPGLLEEISKTGIASGLKFELFAPQPEVVHDFYVELPIKITIVGSYMQLARFLSRVAEMNR
IVTLHEFSVEGVSSGDGKTVSQDELVMGITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=169855 AXF37_RS04725 WP_027221266.1 1030858..1031457(+) (pilO) [Legionella pneumophila subsp. pascullei strain D-7119]
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGAACCATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCTGGGCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTTGCTGAAATGAACAGA
ATCGTGACTTTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACTGCTAAAATATACAGATATCGGGCACAATGA
ATGGATACAGTCAATTTAAGTGAATTAACTCTGGAGAATGTCGGCCAGTGGCCAATGCCGGTTAAAATCGGAGTCATTTT
AGGCATCAGTATATTGATAATTGGATTGGGATATTGGCTTATTGTTAAGCCAAATTTTGAGCAATTGGATACACTGGAAG
CCCAGGAAATTGCTTTGAAAACAGAGTTTGAAAAAAAGCAACATCAGGCAGCAAATCTACAAGCCTATCGTAATCAGTTA
CAGTTAATGAATGAACGCTTTGGAACCATGCTAAAACAACTCCCGGCAAAAAATGAAATGCCTGGGCTTTTGGAAGAAAT
ATCTAAAACAGGGATCGCATCGGGTTTGAAATTTGAATTGTTTGCACCACAACCTGAAGTAGTGCATGATTTTTATGTGG
AGTTACCTATAAAAATTACGATTGTCGGATCCTATATGCAATTAGCAAGATTTTTAAGTCGTGTTGCTGAAATGAACAGA
ATCGTGACTTTGCATGAATTTAGTGTTGAGGGGGTATCCTCCGGGGATGGTAAAACGGTCTCTCAGGATGAATTGGTGAT
GGGTATCACTGCTAAAATATACAGATATCGGGCACAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
97.487 |
100 |
0.975 |
| comO | Acinetobacter baylyi ADP1 |
39.894 |
94.472 |
0.377 |
| pilO | Acinetobacter baumannii D1279779 |
38.22 |
95.98 |
0.367 |