Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AXX03_RS02120 Genome accession   NZ_CP017306
Coordinates   443443..443850 (+) Length   135 a.a.
NCBI ID   WP_096834138.1    Uniprot ID   -
Organism   Pseudomonas aeruginosa strain PA_150577     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 438443..448850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXX03_RS02090 (AXX03_02035) - 438491..439495 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  AXX03_RS02095 (AXX03_02040) pyrR 439519..440031 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  AXX03_RS02100 (AXX03_02045) ruvX 440143..440577 (-) 435 WP_003121753.1 Holliday junction resolvase RuvX -
  AXX03_RS02105 (AXX03_02050) - 440577..441146 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  AXX03_RS02110 (AXX03_02055) - 441195..442088 (-) 894 WP_003160914.1 energy transducer TonB -
  AXX03_RS02115 (AXX03_02060) gshB 442235..443188 (-) 954 WP_014602389.1 glutathione synthase -
  AXX03_RS02120 (AXX03_02065) pilG 443443..443850 (+) 408 WP_096834138.1 twitching motility response regulator PilG Regulator
  AXX03_RS02125 (AXX03_02070) pilH 443897..444262 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  AXX03_RS02130 (AXX03_02075) - 444313..444849 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  AXX03_RS02135 (AXX03_02080) pilJ 444934..446982 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  AXX03_RS02140 (AXX03_02085) pilK 447043..447918 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14790.18 Da        Isoelectric Point: 6.4614

>NTDB_id=168064 AXX03_RS02120 WP_096834138.1 443443..443850(+) (pilG) [Pseudomonas aeruginosa strain PA_150577]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKERIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=168064 AXX03_RS02120 WP_096834138.1 443443..443850(+) (pilG) [Pseudomonas aeruginosa strain PA_150577]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGAGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.016

94.074

0.696
  vicR Streptococcus mutans UA159

43.59

86.667

0.378
  chpA Acinetobacter baumannii strain A118

37.692

96.296

0.363

Multiple sequence alignment