Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AL549_RS20105 | Genome accession | NZ_CP014049 |
| Coordinates | 2492535..2493125 (-) | Length | 196 a.a. |
| NCBI ID | WP_011079354.1 | Uniprot ID | A0A3Q0L3M6 |
| Organism | Vibrio vulnificus strain FDAARGOS_119 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2487535..2498125
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AL549_RS20085 (AL549_18555) | aroB | 2488391..2489482 (-) | 1092 | WP_061058951.1 | 3-dehydroquinate synthase | - |
| AL549_RS20090 (AL549_18560) | aroK | 2489515..2490033 (-) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| AL549_RS20095 (AL549_18565) | pilQ | 2490235..2492019 (-) | 1785 | WP_011079356.1 | type IV pilus secretin PilQ | Machinery gene |
| AL549_RS20100 (AL549_18570) | pilP | 2492033..2492545 (-) | 513 | WP_011079355.1 | pilus assembly protein PilP | Machinery gene |
| AL549_RS20105 (AL549_18575) | pilO | 2492535..2493125 (-) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AL549_RS20110 (AL549_18580) | pilN | 2493118..2493708 (-) | 591 | WP_011079353.1 | PilN domain-containing protein | Machinery gene |
| AL549_RS20115 (AL549_18585) | pilM | 2493698..2494705 (-) | 1008 | WP_011151279.1 | type IV pilus assembly protein PilM | Machinery gene |
| AL549_RS20120 (AL549_18590) | - | 2494845..2497358 (+) | 2514 | WP_061058952.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22749.25 Da Isoelectric Point: 5.0836
>NTDB_id=168030 AL549_RS20105 WP_011079354.1 2492535..2493125(-) (pilO) [Vibrio vulnificus strain FDAARGOS_119]
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
MASWQDLDIDEITDWPILPQAAVVVLLMLIIQGFGYWFYLKPETEVLQRMVTEEQTLKISARIKATKVAALPQLQSQLDE
LTQRYEFLLKQLPVQKELATMLASVNELGIQSKLTFTRIDWGEKQTKDFLYQLPLNIELTGDYHDIGEFSEAIARLPRII
SFTDVTWHRVSMESSTLHFRVKANTYQFKSEAVHEK
Nucleotide
Download Length: 591 bp
>NTDB_id=168030 AL549_RS20105 WP_011079354.1 2492535..2493125(-) (pilO) [Vibrio vulnificus strain FDAARGOS_119]
ATGGCTAGTTGGCAAGATCTCGATATTGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGTTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCTGCCTTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAGGAGTTGGCGACGATGCTGGCCTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATCGATTGGGGGGAGAAGCAAACCAAGGACTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCCCGCTTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
ATGGCTAGTTGGCAAGATCTCGATATTGATGAAATCACAGATTGGCCGATTTTACCGCAGGCGGCGGTTGTCGTGTTGCT
GATGTTGATCATTCAAGGTTTTGGTTATTGGTTCTATCTCAAGCCGGAAACGGAAGTGTTGCAAAGGATGGTCACAGAAG
AGCAAACGCTGAAAATCTCGGCTCGAATTAAGGCGACCAAAGTGGCTGCCTTGCCGCAACTTCAATCGCAACTTGATGAA
CTGACTCAGCGCTATGAATTCTTACTTAAGCAACTGCCCGTGCAGAAGGAGTTGGCGACGATGCTGGCCTCGGTCAATGA
ACTCGGCATTCAAAGTAAGCTCACGTTTACACGTATCGATTGGGGGGAGAAGCAAACCAAGGACTTCCTTTACCAACTGC
CTTTGAATATTGAGTTAACCGGGGATTATCACGATATCGGTGAATTTTCTGAAGCGATTGCCCGCTTGCCTCGCATTATC
AGTTTTACCGATGTGACTTGGCATCGAGTGAGTATGGAAAGCAGCACCTTGCACTTCCGAGTAAAAGCGAACACCTATCA
GTTCAAGTCGGAGGCTGTCCATGAGAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
73.016 |
96.429 |
0.704 |
| pilO | Vibrio cholerae strain A1552 |
67.347 |
100 |
0.673 |