Detailed information NTG0167663

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: A4W86_RS06710
• Genome accession: NZ_CP017272
• Coordinates: 1340215..1342527 (-)
• Length: 770 a.a.
• NCBI ID: WP_251950587.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain TMW 1.1239
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1335215..1347527

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4W86_RS06685 (A4W86_06640)	-	1336349..1338094 (-)	1746	WP_251950566.1	ABC transporter transmembrane domain-containing protein	-
A4W86_RS06690 (A4W86_06645)	-	1338236..1338466 (-)	231	WP_011374970.1	YneF family protein	-
A4W86_RS06695 (A4W86_06650)	-	1338547..1338789 (-)	243	WP_016265356.1	DUF896 domain-containing protein	-
A4W86_RS06700 (A4W86_06655)	dinR/lexA	1338924..1339538 (+)	615	WP_011374972.1	transcriptional repressor LexA	Regulator
A4W86_RS06705 (A4W86_06660)	-	1339673..1340191 (-)	519	WP_011374973.1	adenine phosphoribosyltransferase	-
A4W86_RS06710 (A4W86_06665)	recJ	1340215..1342527 (-)	2313	WP_251950587.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
A4W86_RS06715 (A4W86_06670)	galE	1342672..1343664 (+)	993	WP_061827025.1	UDP-glucose 4-epimerase GalE	-
A4W86_RS06720 (A4W86_06675)	-	1343750..1344115 (+)	366	WP_011374976.1	DUF1304 domain-containing protein	-
A4W86_RS06725 (A4W86_06680)	-	1344132..1344458 (+)	327	WP_011374977.1	heavy metal-binding domain-containing protein	-
A4W86_RS06730 (A4W86_06685)	-	1344509..1346227 (-)	1719	WP_061827024.1	WxL domain-containing protein	-
A4W86_RS06735 (A4W86_06690)	-	1346217..1346612 (-)	396	WP_016265361.1	LPXTG cell wall anchor domain-containing protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84881.67 Da
• Isoelectric Point: 4.5390

>NTDB_id=167663 A4W86_RS06710 WP_251950587.1 1340215..1342527(-) (recJ) [Latilactobacillus sakei strain TMW 1.1239]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPNVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GIDVVVTDHHELPSELPNAVAIVHPRHPEGQYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVQEITATAMTIAETPENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQTAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGRTTLQLMVKD
LATSGQVVLDQRSNRLTQQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAAYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=167663 A4W86_RS06710 WP_251950587.1 1340215..1342527(-) (recJ) [Latilactobacillus sakei strain TMW 1.1239]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAAGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCCAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCAATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGAATTCAAGAAGCGATTGTGAACGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATCACAAGTACCACTTTGATGAAGGAAACTTTAGACGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAATCGTTTTAAGGATGGCTACGGGCCTAATTTAGAAGCTTATAAACGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTCGATAACGGGGTGAGTGGCTTAGAACCAATCGCTTATGCGCAAGAACAC
GGTATTGACGTGGTCGTGACCGATCACCATGAATTACCATCAGAATTACCCAACGCAGTGGCGATTGTGCATCCCAGACA
TCCAGAAGGGCAATATCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCCGCAATCGGGACGGTTTGTGATATCGTCCCCCTAGTTGATGAAAACCGGACATTG
GTTAGTTTAGGCTTACAACAATTACAAAATACCGATCGACCAGGTTTGGTCGCATTGTGTCAATCAGCTGGCTTAGAACA
AGCGACACTAGATGCCACTAACATTGGCTTTGGGATTGGTCCCCGTTTAAACGCAATTGGTCGTTTAGGTGATGCAACTC
TTGGTGTGCAACTATTGACGACGCTTGATGACGAAGAAGCAGTCGAGCAGGCCCAATTTATTGAACAACAAAATAAAAAA
CGCCAAGGTCTAGTGCAAGAAATTACGGCAACGGCAATGACAATTGCTGAAACACCGGAAAACCAAGCGAGTGCCACCTT
AGTTATTGCCCACGAAGGTTGGCATGAAGGGGTTCTAGGGATTGTGGCTAGTCATGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGACCCGGAAACTGGTTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTCCATTTATTTAAA
GCGTTAGATGCCCACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACTGCTAAGGTTGATCA
ATTAGCGCTGATTCAAACTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACAGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGCTAGCTGATATTACGCCTGATTTATATCAAGCATTACAACAACTAGCACCTTTTGGCAGTGAT
AATCCAGAACCGTTGATTGAACTTAGCGCGCCCCAGTTGGCCGATGTCAAACAAATCGGTGCTGATCAGAAACATTTGAA
GATGATGGCGGTCGATCAACAACAACAATTAGCGGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGGAGTTTGAGTGAGAATACTTGGCGTGGCCGGACGACGTTGCAATTAATGGTAAAAGAC
CTTGCTACAAGTGGGCAAGTCGTACTTGATCAACGTAGCAATCGTCTGACGCAGCAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCGCTGTTAGCGACCGATG
AACAAGTTGCTACTAGCCAAGAGTTGATTGTGGTTGATGAACCAGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCTGCTAAATTAAGCTTGATTTTTTATGCCAAACACTCTGCTTACTTAGAAGGAATGCCGACAAAACAACAGTT
TGCGACTTTCTTAGTCTACTTGCGGAAACATCCGAACATTGAAAAAGCGCGGTTAGCTGAATTGGCAGCGTATTTAAAAT
TACAATTACCGTTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• RecJ OB domain (RecJ_OB) (454-560)

• DHH family (DHH) (82-226)

• DHHA1 domain (DHHA1) (318-437)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.342	98.831	0.399
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377