Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | BFP66_RS00220 | Genome accession | NZ_CP017142 |
| Coordinates | 32533..33534 (+) | Length | 333 a.a. |
| NCBI ID | WP_004195448.1 | Uniprot ID | A0A0H3MST2 |
| Organism | Streptococcus suis strain GZ0565 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 27533..38534
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFP66_RS00195 (BFP66_00195) | - | 27638..28216 (+) | 579 | WP_024395318.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BFP66_RS00200 (BFP66_00200) | - | 28231..28659 (+) | 429 | WP_024395317.1 | Msa family membrane protein | - |
| BFP66_RS00205 (BFP66_00205) | - | 28652..29524 (+) | 873 | WP_024395316.1 | ABC transporter ATP-binding protein | - |
| BFP66_RS00210 (BFP66_00210) | - | 29530..30300 (+) | 771 | WP_024395315.1 | membrane protein | - |
| BFP66_RS00215 (BFP66_00215) | - | 30303..32015 (+) | 1713 | WP_063725142.1 | ABC transporter ATP-binding protein | - |
| BFP66_RS11015 | - | 32116..32289 (+) | 174 | WP_014637276.1 | hypothetical protein | - |
| BFP66_RS00220 (BFP66_00220) | ruvB | 32533..33534 (+) | 1002 | WP_004195448.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| BFP66_RS00225 (BFP66_00225) | - | 33534..34280 (+) | 747 | WP_024395313.1 | GNAT family N-acetyltransferase | - |
| BFP66_RS00230 (BFP66_00230) | - | 34282..34905 (+) | 624 | WP_024395312.1 | HAD-IA family hydrolase | - |
| BFP66_RS00235 (BFP66_00235) | comR | 35010..35909 (+) | 900 | WP_015646238.1 | helix-turn-helix domain-containing protein | Regulator |
| BFP66_RS00240 (BFP66_00240) | - | 36116..37336 (+) | 1221 | WP_024395311.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37613.12 Da Isoelectric Point: 4.4673
>NTDB_id=166749 BFP66_RS00220 WP_004195448.1 32533..33534(+) (ruvB) [Streptococcus suis strain GZ0565]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK
Nucleotide
Download Length: 1002 bp
>NTDB_id=166749 BFP66_RS00220 WP_004195448.1 32533..33534(+) (ruvB) [Streptococcus suis strain GZ0565]
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCTGTCGGTCTTAACACCCTGTCGGTCAATATCGCTGAAGAGCGTGAAA
CAGTGGAAGACATGTACGAACCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACGCGGACAGGTCGGGTCGCGACAGCT
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCTGTCGGTCTTAACACCCTGTCGGTCAATATCGCTGAAGAGCGTGAAA
CAGTGGAAGACATGTACGAACCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACGCGGACAGGTCGGGTCGCGACAGCT
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Streptococcus pneumoniae TIGR4 |
90.332 |
99.399 |
0.898 |
| ruvB | Streptococcus pneumoniae R6 |
90.03 |
99.399 |
0.895 |
| ruvB | Streptococcus pneumoniae D39 |
90.03 |
99.399 |
0.895 |
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
58.589 |
97.898 |
0.574 |
| ruvB | Helicobacter pylori 26695 |
51.064 |
98.799 |
0.505 |
| ruvB | Synechocystis sp. PCC 6803 |
50.479 |
93.994 |
0.474 |