Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ASL17_RS01785 | Genome accession | NZ_CP013957 |
| Coordinates | 385408..385878 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain V521 isolate Sequencing | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 374823..417321 | 385408..385878 | within | 0 |
Gene organization within MGE regions
Location: 374823..417321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASL17_RS01700 (ASL17_01700) | - | 374823..376028 (-) | 1206 | WP_000264186.1 | tyrosine-type recombinase/integrase | - |
| ASL17_RS01705 (ASL17_01705) | - | 376139..376318 (+) | 180 | WP_000337826.1 | hypothetical protein | - |
| ASL17_RS01710 (ASL17_01710) | - | 376298..377230 (-) | 933 | WP_000392181.1 | hypothetical protein | - |
| ASL17_RS01715 (ASL17_01715) | - | 377262..377987 (-) | 726 | WP_000661437.1 | PH domain-containing protein | - |
| ASL17_RS01720 (ASL17_01720) | - | 378015..378689 (-) | 675 | WP_000775187.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ASL17_RS01725 (ASL17_01725) | - | 378706..379038 (-) | 333 | WP_001055143.1 | helix-turn-helix domain-containing protein | - |
| ASL17_RS01730 (ASL17_01730) | - | 379301..379495 (+) | 195 | WP_000108122.1 | helix-turn-helix domain-containing protein | - |
| ASL17_RS01735 (ASL17_01735) | - | 379495..380262 (+) | 768 | WP_001002757.1 | phage antirepressor Ant | - |
| ASL17_RS01740 (ASL17_01740) | tscA | 380263..380487 (+) | 225 | WP_000187184.1 | type II toxin-antitoxin system antitoxin TscA | - |
| ASL17_RS17335 | - | 380527..380626 (+) | 100 | Protein_344 | hypothetical protein | - |
| ASL17_RS01750 (ASL17_01750) | - | 380775..381038 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| ASL17_RS01755 (ASL17_01755) | - | 381050..381211 (+) | 162 | WP_000066021.1 | DUF1270 family protein | - |
| ASL17_RS01760 (ASL17_01760) | - | 381303..381563 (+) | 261 | WP_000291089.1 | DUF1108 family protein | - |
| ASL17_RS01765 (ASL17_01765) | - | 381572..381835 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| ASL17_RS01770 (ASL17_01770) | - | 381844..383787 (+) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| ASL17_RS01775 (ASL17_01775) | - | 383789..384709 (+) | 921 | WP_000180598.1 | recombinase RecT | - |
| ASL17_RS01780 (ASL17_01780) | - | 384790..385407 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ASL17_RS01785 (ASL17_01785) | ssbA | 385408..385878 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ASL17_RS01790 (ASL17_01790) | - | 385908..386801 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ASL17_RS01795 (ASL17_01795) | - | 386808..387026 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| ASL17_RS01800 (ASL17_01800) | - | 387035..387439 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ASL17_RS01805 (ASL17_01805) | - | 387452..387824 (+) | 373 | Protein_356 | SA1788 family PVL leukocidin-associated protein | - |
| ASL17_RS01810 (ASL17_01810) | - | 387824..388081 (+) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ASL17_RS01815 (ASL17_01815) | - | 388084..388326 (+) | 243 | WP_000221871.1 | SAV1978 family virulence-associated passenger protein | - |
| ASL17_RS01820 (ASL17_01820) | - | 388339..388740 (+) | 402 | WP_000695762.1 | hypothetical protein | - |
| ASL17_RS01825 (ASL17_01825) | - | 388737..389084 (+) | 348 | WP_000979209.1 | YopX family protein | - |
| ASL17_RS01830 (ASL17_01830) | - | 389081..389389 (+) | 309 | WP_000144710.1 | hypothetical protein | - |
| ASL17_RS01835 (ASL17_01835) | - | 389382..389630 (+) | 249 | WP_001065026.1 | DUF1024 family protein | - |
| ASL17_RS01840 (ASL17_01840) | - | 389623..390159 (+) | 537 | WP_000185663.1 | dUTPase | - |
| ASL17_RS01845 (ASL17_01845) | - | 390196..390396 (+) | 201 | WP_000195821.1 | DUF1381 domain-containing protein | - |
| ASL17_RS01850 (ASL17_01850) | - | 390495..390731 (+) | 237 | WP_000608279.1 | DUF7366 family protein | - |
| ASL17_RS01855 (ASL17_01855) | rinB | 390724..390897 (+) | 174 | WP_000591891.1 | transcriptional activator RinB | - |
| ASL17_RS01860 (ASL17_01860) | - | 390898..391263 (+) | 366 | WP_000989954.1 | hypothetical protein | - |
| ASL17_RS01865 (ASL17_01865) | - | 391264..391410 (+) | 147 | WP_000989960.1 | hypothetical protein | - |
| ASL17_RS01870 (ASL17_01870) | - | 391434..391874 (+) | 441 | WP_000162703.1 | RinA family phage transcriptional activator | - |
| ASL17_RS01875 (ASL17_01875) | - | 392185..392679 (+) | 495 | WP_000594082.1 | terminase small subunit | - |
| ASL17_RS01880 (ASL17_01880) | - | 392672..393880 (+) | 1209 | WP_001606760.1 | PBSX family phage terminase large subunit | - |
| ASL17_RS01885 (ASL17_01885) | - | 393834..395312 (+) | 1479 | WP_001159668.1 | phage portal protein | - |
| ASL17_RS01890 (ASL17_01890) | - | 395251..396234 (+) | 984 | WP_014532414.1 | phage head morphogenesis protein | - |
| ASL17_RS01895 (ASL17_01895) | - | 396236..396442 (+) | 207 | WP_000346033.1 | hypothetical protein | - |
| ASL17_RS01900 (ASL17_01900) | - | 396547..397143 (+) | 597 | WP_000366932.1 | phage scaffolding protein | - |
| ASL17_RS01905 (ASL17_01905) | - | 397164..397988 (+) | 825 | WP_001135558.1 | N4-gp56 family major capsid protein | - |
| ASL17_RS01910 (ASL17_01910) | - | 398005..398331 (+) | 327 | WP_000278799.1 | Rho termination factor N-terminal domain-containing protein | - |
| ASL17_RS01915 (ASL17_01915) | - | 398331..398645 (+) | 315 | WP_000338935.1 | phage head-tail connector protein | - |
| ASL17_RS01920 (ASL17_01920) | - | 398638..398973 (+) | 336 | WP_017431444.1 | phage head closure protein | - |
| ASL17_RS01925 (ASL17_01925) | - | 398960..399373 (+) | 414 | WP_001151335.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| ASL17_RS01930 (ASL17_01930) | - | 399386..399823 (+) | 438 | WP_000270196.1 | DUF3168 domain-containing protein | - |
| ASL17_RS01935 (ASL17_01935) | - | 399810..400370 (+) | 561 | WP_000046067.1 | hypothetical protein | - |
| ASL17_RS01940 (ASL17_01940) | - | 400432..400926 (+) | 495 | WP_000141082.1 | tail assembly chaperone | - |
| ASL17_RS01945 (ASL17_01945) | - | 400947..401288 (+) | 342 | WP_001580347.1 | hypothetical protein | - |
| ASL17_RS01950 (ASL17_01950) | - | 401291..404260 (+) | 2970 | WP_000414234.1 | phage tail protein | - |
| ASL17_RS01955 (ASL17_01955) | - | 404275..405210 (+) | 936 | WP_000560193.1 | phage tail domain-containing protein | - |
| ASL17_RS01960 (ASL17_01960) | - | 405221..407104 (+) | 1884 | WP_001144702.1 | SGNH/GDSL hydrolase family protein | - |
| ASL17_RS01965 (ASL17_01965) | - | 407117..409015 (+) | 1899 | WP_000323252.1 | hypothetical protein | - |
| ASL17_RS01970 (ASL17_01970) | - | 409015..410838 (+) | 1824 | WP_000259636.1 | phage baseplate upper protein | - |
| ASL17_RS01975 (ASL17_01975) | - | 410838..411215 (+) | 378 | WP_000869363.1 | DUF2977 domain-containing protein | - |
| ASL17_RS01980 (ASL17_01980) | - | 411225..411398 (+) | 174 | WP_015990323.1 | XkdX family protein | - |
| ASL17_RS01985 (ASL17_01985) | - | 411440..411739 (+) | 300 | WP_000466769.1 | DUF2951 domain-containing protein | - |
| ASL17_RS01990 (ASL17_01990) | - | 411876..413750 (+) | 1875 | WP_000524040.1 | glucosaminidase domain-containing protein | - |
| ASL17_RS01995 (ASL17_01995) | - | 413763..415001 (+) | 1239 | WP_000276640.1 | BppU family phage baseplate upper protein | - |
| ASL17_RS02000 (ASL17_02000) | - | 415006..415401 (+) | 396 | WP_000387945.1 | hypothetical protein | - |
| ASL17_RS02005 (ASL17_02005) | - | 415458..415895 (+) | 438 | WP_000354132.1 | phage holin | - |
| ASL17_RS02010 (ASL17_02010) | - | 415876..417321 (+) | 1446 | WP_001148131.1 | SH3 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=166640 ASL17_RS01785 WP_000934759.1 385408..385878(+) (ssbA) [Staphylococcus aureus strain V521 isolate Sequencing]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=166640 ASL17_RS01785 WP_000934759.1 385408..385878(+) (ssbA) [Staphylococcus aureus strain V521 isolate Sequencing]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |