Detailed information NTG0163437

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: ATM98_RS08730
• Genome accession: NZ_CP013651
• Coordinates: 1800617..1801543 (+)
• Length: 308 a.a.
• NCBI ID: WP_048692005.1
• Uniprot ID: -
• Organism: Streptococcus sp. A12
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1795617..1806543

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATM98_RS08720 (ATM98_08725)	amiA3	1797068..1799053 (+)	1986	WP_061564750.1	peptide ABC transporter substrate-binding protein	Regulator
ATM98_RS08725 (ATM98_08730)	amiC	1799118..1800617 (+)	1500	WP_048692006.1	ABC transporter permease	Regulator
ATM98_RS08730 (ATM98_08735)	amiD	1800617..1801543 (+)	927	WP_048692005.1	oligopeptide ABC transporter permease OppC	Regulator
ATM98_RS08735 (ATM98_08740)	amiE	1801555..1802622 (+)	1068	WP_061564751.1	ABC transporter ATP-binding protein	Regulator
ATM98_RS08740 (ATM98_08745)	amiF	1802632..1803555 (+)	924	WP_048714745.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34538.43 Da
• Isoelectric Point: 9.7758

>NTDB_id=163437 ATM98_RS08730 WP_048692005.1 1800617..1801543(+) (amiD) [Streptococcus sp. A12]
MSTIDKKKFQFVERDDFASETIDAPSYSYWKSVFRQFFKKKSTIFMLAVLVGILLMSFVYPMFSNFDYNDVSKVNDFTAR
LNPPSAKAFFGTDNNGKSLFDGVWFGARNSIIISFIATLINVVIGVVIGGIWGVSKSIDRFMMEVYNVISNVPFMLIVIV
LTYSIGAGFWNLILAMTVTGWIGIAYSIRVQIMRYRDLEYNLASRTLGTPTLKIVTKNILPQLVSVIVTTTTQLLPAFIS
TEAFLSFFGLGLPITVPSLGRLISDYSQNVTTNAYLFWIPLTVLVLVSLSFYIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=163437 ATM98_RS08730 WP_048692005.1 1800617..1801543(+) (amiD) [Streptococcus sp. A12]
ATGTCTACAATCGATAAAAAGAAATTCCAATTTGTTGAACGTGACGACTTTGCCTCTGAAACAATTGATGCGCCGTCGTA
CTCCTACTGGAAATCAGTATTTCGCCAATTTTTCAAAAAGAAATCAACCATTTTCATGTTAGCAGTCTTGGTGGGGATTC
TCTTGATGAGTTTTGTTTATCCAATGTTTTCAAACTTTGATTACAATGATGTAAGTAAAGTAAATGATTTCACTGCTCGT
TTGAATCCTCCAAGTGCCAAAGCTTTCTTTGGTACAGATAACAATGGTAAATCGTTGTTTGATGGAGTTTGGTTTGGTGC
CCGCAATTCGATTATCATCTCTTTTATTGCTACCTTGATCAACGTTGTGATTGGTGTAGTGATTGGTGGGATTTGGGGTG
TGTCAAAATCAATCGACCGCTTCATGATGGAAGTTTATAACGTTATTTCAAACGTTCCATTCATGTTGATTGTTATTGTC
TTGACTTACTCAATCGGTGCTGGTTTCTGGAACTTGATTTTGGCGATGACGGTAACAGGATGGATTGGGATTGCTTATTC
TATCCGTGTCCAAATTATGCGTTACCGTGATTTAGAGTACAACTTGGCCAGCCGTACTTTGGGGACTCCAACTCTAAAAA
TCGTGACAAAAAATATTTTGCCGCAGTTGGTATCTGTTATTGTGACGACGACAACTCAATTGTTGCCAGCCTTTATTTCA
ACTGAAGCCTTCCTTTCTTTCTTTGGATTGGGATTGCCAATTACAGTTCCAAGTTTAGGTCGTCTGATTTCAGACTACTC
ACAAAACGTAACAACCAATGCGTATCTTTTCTGGATTCCATTGACAGTCTTAGTCTTGGTATCCTTGTCATTCTATATCG
TTGGACAAAACCTTGCAGATGCCAGCGATCCACGTACACATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-84)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	77.597	100	0.776
amiD	Streptococcus thermophilus LMG 18311	76.623	100	0.766
amiD	Streptococcus thermophilus LMD-9	76.623	100	0.766