Detailed information NTG0163439

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: ATM98_RS08740
• Genome accession: NZ_CP013651
• Coordinates: 1802632..1803555 (+)
• Length: 307 a.a.
• NCBI ID: WP_048714745.1
• Uniprot ID: A0A7X2VKX0
• Organism: Streptococcus sp. A12
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1797632..1808555

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATM98_RS08725 (ATM98_08730)	amiC	1799118..1800617 (+)	1500	WP_048692006.1	ABC transporter permease	Regulator
ATM98_RS08730 (ATM98_08735)	amiD	1800617..1801543 (+)	927	WP_048692005.1	oligopeptide ABC transporter permease OppC	Regulator
ATM98_RS08735 (ATM98_08740)	amiE	1801555..1802622 (+)	1068	WP_061564751.1	ABC transporter ATP-binding protein	Regulator
ATM98_RS08740 (ATM98_08745)	amiF	1802632..1803555 (+)	924	WP_048714745.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34851.97 Da
• Isoelectric Point: 6.1185

>NTDB_id=163439 ATM98_RS08740 WP_048714745.1 1802632..1803555(+) (amiF) [Streptococcus sp. A12]
MTEKLIEVKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDILYDGKKINGKQSRK
DENELIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFENEEDRVRKVKEIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSTDKPEMVEIKPGHYVWANKAEQKKYKELV

Nucleotide

• Length: 924 bp

>NTDB_id=163439 ATM98_RS08740 WP_048714745.1 1802632..1803555(+) (amiF) [Streptococcus sp. A12]
ATGACAGAAAAATTAATAGAAGTTAAAGATCTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTTGTAGCTGTAAAGAA
TGCAAATTTCTTCATCAACAAAGGGGAAACATTTTCTCTTGTTGGTGAGTCTGGTAGTGGGAAGACAACAATTGGTCGTG
CAATCATTGGTTTGAATGACACTAGTGCAGGTGACATCCTGTATGATGGCAAAAAAATCAATGGGAAGCAATCGCGTAAG
GATGAAAATGAATTAATCCGAAAAATTCAAATGATCTTCCAAGACCCGGCAGCAAGTTTGAATGAGCGTGCAACAGTCGA
CTACATTATTTCAGAAGGTTTGTACAATTATCACCTATTCGAAAATGAAGAAGACCGAGTACGTAAAGTAAAAGAGATTA
TGCATGAAGTGGGGCTTCTAGCAGAGCATTTAACTCGTTATCCTCATGAATTCTCTGGTGGACAACGCCAGCGGATTGGA
ATTGCTCGTGCCTTGGTAATGGAACCAGAATTTGTTATCGCAGACGAGCCAATTTCAGCCCTTGACGTATCCGTACGTGC
GCAAGTTTTAAATCTCCTTAAGAAATTCCAAAAGGAGTTGGGCTTGACCTATCTCTTTATCGCACACGATCTTTCAGTCG
TTCGATTTATCTCTGATCGTATTGCGGTTATTTACAAAGGAGTTATTGTAGAAGTAGCTGAAACGGAAGAATTGTTTAAT
AATCCAATTCATCCATACACGCAATCTCTACTATCAGCTGTACCGATTCCAGATCCAATTCTAGAACGCAAAAAAGTTCT
GAAAGTTTATGATCCTGATCAGCATGATTATTCAACCGACAAACCAGAAATGGTTGAAATCAAACCTGGACATTACGTTT
GGGCAAATAAAGCAGAACAGAAAAAATATAAAGAACTTGTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: A0A7X2VKX0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	84.59	99.349	0.84
amiF	Streptococcus thermophilus LMG 18311	84.262	99.349	0.837
amiF	Streptococcus thermophilus LMD-9	83.934	99.349	0.834