Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AMC84_RS10570 | Genome accession | NZ_CP013552 |
| Coordinates | 2161336..2161851 (+) | Length | 171 a.a. |
| NCBI ID | WP_004671899.1 | Uniprot ID | A0A1C3XWR3 |
| Organism | Rhizobium phaseoli strain N931 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2156336..2166851
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMC84_RS10555 (AMC84_CH02148) | - | 2156844..2157650 (-) | 807 | WP_064823122.1 | DUF72 domain-containing protein | - |
| AMC84_RS10560 (AMC84_CH02149) | - | 2157674..2158135 (-) | 462 | WP_064822007.1 | GNAT family N-acetyltransferase | - |
| AMC84_RS10565 (AMC84_CH02150) | uvrA | 2158132..2161053 (-) | 2922 | WP_064822008.1 | excinuclease ABC subunit UvrA | - |
| AMC84_RS10570 (AMC84_CH02151) | ssb | 2161336..2161851 (+) | 516 | WP_004671899.1 | single-stranded DNA-binding protein | Machinery gene |
| AMC84_RS10575 (AMC84_CH02152) | - | 2161954..2162601 (-) | 648 | WP_004671901.1 | MarC family protein | - |
| AMC84_RS10580 (AMC84_CH02153) | gyrA | 2162839..2165661 (+) | 2823 | WP_064822009.1 | DNA gyrase subunit A | - |
| AMC84_RS34835 (AMC84_CH02154) | - | 2165917..2166051 (-) | 135 | WP_004671905.1 | hypothetical protein | - |
| AMC84_RS33985 (AMC84_CH02155) | - | 2166088..2166243 (-) | 156 | WP_003539654.1 | hypothetical protein | - |
| AMC84_RS10585 (AMC84_CH02156) | - | 2166386..2166664 (-) | 279 | WP_064822010.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18406.10 Da Isoelectric Point: 5.3093
>NTDB_id=163119 AMC84_RS10570 WP_004671899.1 2161336..2161851(+) (ssb) [Rhizobium phaseoli strain N931]
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=163119 AMC84_RS10570 WP_004671899.1 2161336..2161851(+) (ssb) [Rhizobium phaseoli strain N931]
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAACGTGGGTGCAGATCCCGAAATCCGCCGCACTCAGGATGGCCG
GCCGATCGCCAATCTCCGTATCGCGACCTCGGAGACCTGGCGCGACCGCAATTCCGGCGAACGCCGCGAAAAGACGGAAT
GGCACACTGTCGTCGTCTTCAACGAAGGCCTCTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAGCTGCAGACCCGCAAATGGCAGGACCAGCAGGGCCAGGACCGTTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACCATGCTCGACGGCCGCGGTGATGGCGGCGGCGCGAGCTCCGGCTTCGGCGGCGGCCGCGGCGGCA
GCAGCAACAATGATTACGGCGACGATTATGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAACGTGGGTGCAGATCCCGAAATCCGCCGCACTCAGGATGGCCG
GCCGATCGCCAATCTCCGTATCGCGACCTCGGAGACCTGGCGCGACCGCAATTCCGGCGAACGCCGCGAAAAGACGGAAT
GGCACACTGTCGTCGTCTTCAACGAAGGCCTCTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAGCTGCAGACCCGCAAATGGCAGGACCAGCAGGGCCAGGACCGTTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACCATGCTCGACGGCCGCGGTGATGGCGGCGGCGCGAGCTCCGGCTTCGGCGGCGGCCGCGGCGGCA
GCAGCAACAATGATTACGGCGACGATTATGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
48.571 |
100 |
0.497 |
| ssb | Glaesserella parasuis strain SC1401 |
44.681 |
100 |
0.491 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.398 |
| ssb | Neisseria meningitidis MC58 |
37.778 |
100 |
0.398 |