Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AMC86_RS10630 | Genome accession | NZ_CP013542 |
| Coordinates | 2164888..2165403 (+) | Length | 171 a.a. |
| NCBI ID | WP_004671899.1 | Uniprot ID | A0A1C3XWR3 |
| Organism | Rhizobium phaseoli strain R620 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2159888..2170403
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMC86_RS10615 (AMC86_CH02163) | - | 2160396..2161202 (-) | 807 | WP_012483789.1 | DUF72 domain-containing protein | - |
| AMC86_RS10620 (AMC86_CH02164) | - | 2161226..2161687 (-) | 462 | WP_064825255.1 | GNAT family N-acetyltransferase | - |
| AMC86_RS10625 (AMC86_CH02165) | uvrA | 2161684..2164605 (-) | 2922 | WP_012483791.1 | excinuclease ABC subunit UvrA | - |
| AMC86_RS10630 (AMC86_CH02166) | ssb | 2164888..2165403 (+) | 516 | WP_004671899.1 | single-stranded DNA-binding protein | Machinery gene |
| AMC86_RS10635 (AMC86_CH02167) | - | 2165505..2166152 (-) | 648 | WP_004671901.1 | MarC family protein | - |
| AMC86_RS10640 (AMC86_CH02168) | gyrA | 2166390..2169212 (+) | 2823 | WP_029531195.1 | DNA gyrase subunit A | - |
| AMC86_RS34155 (AMC86_CH02169) | - | 2169443..2169577 (-) | 135 | WP_004671905.1 | hypothetical protein | - |
| AMC86_RS33370 (AMC86_CH02170) | - | 2169614..2169769 (-) | 156 | WP_003539654.1 | hypothetical protein | - |
| AMC86_RS10645 (AMC86_CH02171) | - | 2169912..2170190 (-) | 279 | WP_064825256.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18406.10 Da Isoelectric Point: 5.3093
>NTDB_id=163105 AMC86_RS10630 WP_004671899.1 2164888..2165403(+) (ssb) [Rhizobium phaseoli strain R620]
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=163105 AMC86_RS10630 WP_004671899.1 2164888..2165403(+) (ssb) [Rhizobium phaseoli strain R620]
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAATGTGGGTGCAGATCCCGAAATCCGCCGCACTCAGGATGGCCG
GCCGATCGCCAATCTTCGTATCGCGACCTCGGAGACCTGGCGTGACCGCAATTCCGGCGAACGCCGCGAAAAGACGGAAT
GGCACACTGTCGTCGTCTTCAACGAAGGCCTCTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAATTGCAGACCCGCAAGTGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACGATGCTCGACGGCCGCGGCGATGGCGGCGGCGCAAGCTCCGGCTTCGGCGGCGGCCGTGGCGGCA
GCAGCAACAATGACTACGGCGACGATTATGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAATGTGGGTGCAGATCCCGAAATCCGCCGCACTCAGGATGGCCG
GCCGATCGCCAATCTTCGTATCGCGACCTCGGAGACCTGGCGTGACCGCAATTCCGGCGAACGCCGCGAAAAGACGGAAT
GGCACACTGTCGTCGTCTTCAACGAAGGCCTCTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAATTGCAGACCCGCAAGTGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACGATGCTCGACGGCCGCGGCGATGGCGGCGGCGCAAGCTCCGGCTTCGGCGGCGGCCGTGGCGGCA
GCAGCAACAATGACTACGGCGACGATTATGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
48.571 |
100 |
0.497 |
| ssb | Glaesserella parasuis strain SC1401 |
44.681 |
100 |
0.491 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.398 |
| ssb | Neisseria meningitidis MC58 |
37.778 |
100 |
0.398 |