Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | AMC90_RS10410 | Genome accession | NZ_CP013522 |
| Coordinates | 2135550..2136065 (+) | Length | 171 a.a. |
| NCBI ID | WP_004671899.1 | Uniprot ID | A0A1C3XWR3 |
| Organism | Rhizobium phaseoli strain R744 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2130550..2141065
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMC90_RS10395 (AMC90_CH02126) | - | 2131058..2131864 (-) | 807 | WP_012483789.1 | DUF72 domain-containing protein | - |
| AMC90_RS10400 (AMC90_CH02127) | - | 2131888..2132349 (-) | 462 | WP_064825255.1 | GNAT family N-acetyltransferase | - |
| AMC90_RS10405 (AMC90_CH02128) | uvrA | 2132346..2135267 (-) | 2922 | WP_012483791.1 | excinuclease ABC subunit UvrA | - |
| AMC90_RS10410 (AMC90_CH02129) | ssb | 2135550..2136065 (+) | 516 | WP_004671899.1 | single-stranded DNA-binding protein | Machinery gene |
| AMC90_RS10415 (AMC90_CH02130) | - | 2136167..2136814 (-) | 648 | WP_004671901.1 | MarC family protein | - |
| AMC90_RS10420 (AMC90_CH02131) | gyrA | 2137052..2139874 (+) | 2823 | WP_029531195.1 | DNA gyrase subunit A | - |
| AMC90_RS34075 (AMC90_CH02132) | - | 2140105..2140239 (-) | 135 | WP_004671905.1 | hypothetical protein | - |
| AMC90_RS33200 (AMC90_CH02133) | - | 2140276..2140431 (-) | 156 | WP_003539654.1 | hypothetical protein | - |
| AMC90_RS10425 (AMC90_CH02134) | - | 2140574..2140852 (-) | 279 | WP_064825256.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18406.10 Da Isoelectric Point: 5.3093
>NTDB_id=163077 AMC90_RS10410 WP_004671899.1 2135550..2136065(+) (ssb) [Rhizobium phaseoli strain R744]
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
MAGSVNKVILVGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTEWHTVVVFNEGLCKVVEQYVKKGAKLYI
EGQLQTRKWQDQQGQDRYSTEVVLQGFSSTLTMLDGRGDGGGASSGFGGGRGGSSNNDYGDDYGAPAPSSSPSRGGGGGN
FSRDLDDDIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=163077 AMC90_RS10410 WP_004671899.1 2135550..2136065(+) (ssb) [Rhizobium phaseoli strain R744]
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAATGTGGGTGCAGATCCCGAAATCCGCCGCACTCAGGATGGCCG
GCCGATCGCCAATCTTCGTATCGCGACCTCGGAGACCTGGCGTGACCGCAATTCCGGCGAACGCCGCGAAAAGACGGAAT
GGCACACTGTCGTCGTCTTCAACGAAGGCCTCTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAATTGCAGACCCGCAAGTGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACGATGCTCGACGGCCGCGGCGATGGCGGCGGCGCAAGCTCCGGCTTCGGCGGCGGCCGTGGCGGCA
GCAGCAACAATGACTACGGCGACGATTATGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
ATGGCTGGTAGCGTGAACAAGGTAATTCTGGTTGGAAATGTGGGTGCAGATCCCGAAATCCGCCGCACTCAGGATGGCCG
GCCGATCGCCAATCTTCGTATCGCGACCTCGGAGACCTGGCGTGACCGCAATTCCGGCGAACGCCGCGAAAAGACGGAAT
GGCACACTGTCGTCGTCTTCAACGAAGGCCTCTGCAAGGTCGTCGAGCAATATGTGAAGAAGGGCGCCAAGCTCTATATC
GAAGGCCAATTGCAGACCCGCAAGTGGCAGGACCAGCAGGGCCAGGACCGCTACTCGACGGAAGTGGTGCTGCAGGGCTT
CAGCTCGACGCTGACGATGCTCGACGGCCGCGGCGATGGCGGCGGCGCAAGCTCCGGCTTCGGCGGCGGCCGTGGCGGCA
GCAGCAACAATGACTACGGCGACGATTATGGCGCCCCGGCTCCCTCTTCATCGCCGAGCCGCGGCGGTGGCGGCGGCAAC
TTCTCGCGCGATCTCGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
48.571 |
100 |
0.497 |
| ssb | Glaesserella parasuis strain SC1401 |
44.681 |
100 |
0.491 |
| ssb | Neisseria gonorrhoeae MS11 |
37.778 |
100 |
0.398 |
| ssb | Neisseria meningitidis MC58 |
37.778 |
100 |
0.398 |