Detailed information NTG0162129

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: A6L46_RS03375
• Genome accession: NZ_CP016660
• Coordinates: 664586..665617 (+)
• Length: 343 a.a.
• NCBI ID: WP_002234902.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain M22804
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 659586..670617

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6L46_RS03355 (A6L46_03355)	-	660496..660870 (-)	375	WP_002258589.1	arsenate reductase	-
A6L46_RS03360 (A6L46_03360)	-	661020..662648 (+)	1629	WP_002234899.1	ABC-F family ATPase	-
A6L46_RS03365 (A6L46_03365)	-	662720..663973 (+)	1254	WP_002234900.1	multifunctional CCA addition/repair protein	-
A6L46_RS03370 (A6L46_03370)	-	664196..664504 (+)	309	WP_002234901.1	hypothetical protein	-
A6L46_RS03375 (A6L46_03375)	ruvB	664586..665617 (+)	1032	WP_002234902.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
A6L46_RS03380 (A6L46_03380)	-	665682..666647 (-)	966	WP_002241636.1	IS30-like element IS1655 family transposase	-
A6L46_RS03385 (A6L46_03385)	rpe	666702..667451 (-)	750	WP_002234903.1	ribulose-phosphate 3-epimerase	-
A6L46_RS03390 (A6L46_03390)	-	667762..668196 (+)	435	WP_002229506.1	Spy/CpxP family protein refolding chaperone	-
A6L46_RS03395 (A6L46_03395)	-	668209..669072 (-)	864	WP_002243531.1	ATP-binding protein	-
A6L46_RS14150 (A6L46_03400)	-	669080..669697 (-)	618	WP_002217135.1	riboflavin synthase	-
A6L46_RS14155 (A6L46_03405)	-	669860..670474 (-)	615	WP_015815602.1	molybdenum cofactor guanylyltransferase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37790.31 Da
• Isoelectric Point: 5.0462

>NTDB_id=162129 A6L46_RS03375 WP_002234902.1 664586..665617(+) (ruvB) [Neisseria meningitidis strain M22804]
MLQTDNLTAAQPQRIITAQSISSQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRKFLEAILHKFSGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Nucleotide

• Length: 1032 bp

>NTDB_id=162129 A6L46_RS03375 WP_002234902.1 664586..665617(+) (ruvB) [Neisseria meningitidis strain M22804]
ATGCTGCAAACCGACAACCTAACCGCTGCCCAGCCCCAGCGCATCATCACTGCCCAAAGCATCTCCTCACAAGAAGAGTT
GCTCGAACGTGCCCTGCGTCCTAAAACGCTGGACGACTATATCGGGCAAGACAAAGCCAAAGAACAGCTTGCCATTTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTTTTGCTCTTCGGCCCGCCCGGACTGGGCAAAACCACACTG
GCGCACATCATCGCCAAAGAGCTGGGCGTCAACCTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCCGGCGACCTTGC
CGCCCTTCTGACCAACCTTGATCCGCACGATGTATTGTTCATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCCCGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACCCTCGTCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCGTAATCGATGCCGCCGTCGCCGATGCCGCTTTAAGCATGCTGGATGTGGACGC
GCAAGGTTTGGATGTTATGGACAGAAAATTCCTCGAAGCCATCCTGCATAAATTCAGCGGCGGCCCCGTCGGTTTGGACA
ACGTTGCCGCCGCCATCGGCGAATCTACAGACACCATCGAAGACGTTATCGAACCCTATCTCATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (268-337)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (32-190)

• RuvB AAA lid domain (AAA_lid_4) (193-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	62.229	94.169	0.586
ruvB	Streptococcus pneumoniae D39	62.229	94.169	0.586
ruvB	Streptococcus pneumoniae TIGR4	61.92	94.169	0.583
ruvB	Bacillus subtilis subsp. subtilis str. 168	59.939	95.335	0.571
ruvB	Synechocystis sp. PCC 6803	55.488	95.627	0.531
ruvB	Helicobacter pylori 26695	56.869	91.254	0.519