Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CPter291_RS02305 | Genome accession | NZ_CP013236 |
| Coordinates | 524646..525146 (+) | Length | 166 a.a. |
| NCBI ID | WP_061936514.1 | Uniprot ID | A0A127PYP5 |
| Organism | Collimonas pratensis strain Ter291 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 519646..530146
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPter291_RS02290 (CPter291_0484) | - | 519653..520468 (+) | 816 | WP_082806909.1 | alpha/beta fold hydrolase | - |
| CPter291_RS02295 (CPter291_0486) | - | 520826..522763 (-) | 1938 | WP_062111740.1 | S53 family peptidase | - |
| CPter291_RS02300 (CPter291_0487) | - | 523394..524590 (+) | 1197 | WP_156480196.1 | MFS transporter | - |
| CPter291_RS02305 (CPter291_0488) | ssb | 524646..525146 (+) | 501 | WP_061936514.1 | single-stranded DNA-binding protein | Machinery gene |
| CPter291_RS02310 (CPter291_0489) | - | 525522..525818 (+) | 297 | WP_062111744.1 | DUF2917 domain-containing protein | - |
| CPter291_RS02315 (CPter291_0490) | - | 525822..526994 (+) | 1173 | WP_231880031.1 | hypothetical protein | - |
| CPter291_RS02320 (CPter291_0491) | - | 527049..527681 (+) | 633 | WP_061936519.1 | GNAT family N-acetyltransferase | - |
| CPter291_RS02325 (CPter291_0492) | - | 527678..528880 (+) | 1203 | WP_062111746.1 | M20/M25/M40 family metallo-hydrolase | - |
| CPter291_RS02330 (CPter291_0493) | - | 528877..529419 (+) | 543 | WP_061936525.1 | cysteine hydrolase | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18110.16 Da Isoelectric Point: 7.0169
>NTDB_id=160936 CPter291_RS02305 WP_061936514.1 524646..525146(+) (ssb) [Collimonas pratensis strain Ter291]
MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNSGEKKELTEWHRITFYRKLAEIAGQYLKKGSQIYVEG
RLQTRKWQDKDGAERYTTEIIADTMQMLGSRQGAGGSAPMDDGGGYNSAPPARQNTGSAPQAAASRPAPASRPAPNFSDM
DDDIPF
MASVNKVIIVGNLGRDPETRYMPNGEAVTNIAVATTESWKDKNSGEKKELTEWHRITFYRKLAEIAGQYLKKGSQIYVEG
RLQTRKWQDKDGAERYTTEIIADTMQMLGSRQGAGGSAPMDDGGGYNSAPPARQNTGSAPQAAASRPAPASRPAPNFSDM
DDDIPF
Nucleotide
Download Length: 501 bp
>NTDB_id=160936 CPter291_RS02305 WP_061936514.1 524646..525146(+) (ssb) [Collimonas pratensis strain Ter291]
ATGGCATCGGTCAATAAAGTCATCATCGTCGGCAATCTCGGCCGCGACCCGGAAACGCGCTACATGCCAAACGGTGAAGC
AGTCACCAACATTGCCGTTGCCACCACGGAAAGCTGGAAAGACAAGAACAGCGGCGAGAAAAAGGAATTAACCGAGTGGC
ACCGCATCACCTTCTACCGCAAGCTGGCGGAAATCGCCGGCCAGTACCTGAAGAAGGGTTCGCAGATCTACGTCGAAGGC
CGCCTGCAGACTCGCAAATGGCAGGACAAGGACGGCGCCGAGCGCTACACCACTGAAATCATCGCCGACACCATGCAGAT
GCTCGGCAGCCGTCAAGGTGCAGGCGGCAGTGCGCCCATGGACGATGGCGGCGGTTACAACAGCGCGCCGCCGGCACGTC
AGAACACCGGCAGCGCACCGCAAGCAGCCGCTTCCCGTCCAGCACCGGCTTCCCGTCCGGCGCCGAATTTTTCGGATATG
GATGACGATATTCCGTTCTGA
ATGGCATCGGTCAATAAAGTCATCATCGTCGGCAATCTCGGCCGCGACCCGGAAACGCGCTACATGCCAAACGGTGAAGC
AGTCACCAACATTGCCGTTGCCACCACGGAAAGCTGGAAAGACAAGAACAGCGGCGAGAAAAAGGAATTAACCGAGTGGC
ACCGCATCACCTTCTACCGCAAGCTGGCGGAAATCGCCGGCCAGTACCTGAAGAAGGGTTCGCAGATCTACGTCGAAGGC
CGCCTGCAGACTCGCAAATGGCAGGACAAGGACGGCGCCGAGCGCTACACCACTGAAATCATCGCCGACACCATGCAGAT
GCTCGGCAGCCGTCAAGGTGCAGGCGGCAGTGCGCCCATGGACGATGGCGGCGGTTACAACAGCGCGCCGCCGGCACGTC
AGAACACCGGCAGCGCACCGCAAGCAGCCGCTTCCCGTCCAGCACCGGCTTCCCGTCCGGCGCCGAATTTTTCGGATATG
GATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
53.552 |
100 |
0.59 |
| ssb | Vibrio cholerae strain A1552 |
53.846 |
100 |
0.59 |
| ssb | Neisseria gonorrhoeae MS11 |
53.672 |
100 |
0.572 |
| ssb | Neisseria meningitidis MC58 |
54.023 |
100 |
0.566 |