Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACA40_RS22435 | Genome accession | NZ_CP013183 |
| Coordinates | 5219481..5220047 (-) | Length | 188 a.a. |
| NCBI ID | WP_003317093.1 | Uniprot ID | A0A0P9GWC5 |
| Organism | Pseudomonas syringae pv. lapsa strain ATCC 10859 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5214481..5225047
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACA40_RS28335 | - | 5215983..5216287 (-) | 305 | Protein_4495 | transposase domain-containing protein | - |
| ACA40_RS26605 | - | 5216304..5216450 (-) | 147 | WP_080337847.1 | hypothetical protein | - |
| ACA40_RS22420 (ACA40_22420) | - | 5216857..5217858 (-) | 1002 | WP_057406090.1 | nucleotidyltransferase domain-containing protein | - |
| ACA40_RS22425 (ACA40_22425) | - | 5217855..5218805 (-) | 951 | WP_057406089.1 | phosphotransferase enzyme family protein | - |
| ACA40_RS22430 (ACA40_22430) | - | 5218798..5219229 (-) | 432 | WP_057406088.1 | hypothetical protein | - |
| ACA40_RS22435 (ACA40_22435) | ssb | 5219481..5220047 (-) | 567 | WP_003317093.1 | single-stranded DNA-binding protein | Machinery gene |
| ACA40_RS22440 (ACA40_22440) | - | 5220057..5221451 (-) | 1395 | WP_003426593.1 | MFS transporter | - |
| ACA40_RS22445 (ACA40_22445) | uvrA | 5221581..5224415 (+) | 2835 | WP_003317094.1 | excinuclease ABC subunit UvrA | - |
| ACA40_RS22450 (ACA40_22450) | bfr | 5224510..5224974 (-) | 465 | WP_003317095.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20917.05 Da Isoelectric Point: 5.9404
>NTDB_id=160447 ACA40_RS22435 WP_003317093.1 5219481..5220047(-) (ssb) [Pseudomonas syringae pv. lapsa strain ATCC 10859]
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDAQQGQGGGNYNQSAPRPQQSRPQQSAPQQSAPQQNYNQQPPQ
QRDSRPAPQQQAPQPAADFDSFDDDIPF
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDAQQGQGGGNYNQSAPRPQQSRPQQSAPQQSAPQQNYNQQPPQ
QRDSRPAPQQQAPQPAADFDSFDDDIPF
Nucleotide
Download Length: 567 bp
>NTDB_id=160447 ACA40_RS22435 WP_003317093.1 5219481..5220047(-) (ssb) [Pseudomonas syringae pv. lapsa strain ATCC 10859]
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGTACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCAACCAGCGAACAGTGGACTGACAAGCAGTCCGGTCAGAAAGTCGAAAAGACCGAAT
GGCACCGTGTATCGATGTTCGGCAAAGTCGCCGAAATCGCCGGCGAATACCTGCGCAAGGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACTGAAATCGTCGTCGACATGCAGGGCAC
CATGCAACTGCTGGGCGGCCGTCCACAGGGCGACGCTCAACAAGGTCAGGGCGGCGGCAACTACAACCAGTCCGCACCTC
GTCCACAGCAGTCGCGTCCACAACAGTCGGCGCCGCAGCAATCTGCACCTCAGCAGAACTACAACCAGCAGCCGCCACAA
CAGCGCGACTCGCGCCCAGCGCCGCAACAACAAGCGCCGCAGCCAGCTGCTGACTTTGATAGCTTTGATGATGATATTCC
GTTCTGA
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGTACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCAACCAGCGAACAGTGGACTGACAAGCAGTCCGGTCAGAAAGTCGAAAAGACCGAAT
GGCACCGTGTATCGATGTTCGGCAAAGTCGCCGAAATCGCCGGCGAATACCTGCGCAAGGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAAGACGGCATCAAGCGCTACACCACTGAAATCGTCGTCGACATGCAGGGCAC
CATGCAACTGCTGGGCGGCCGTCCACAGGGCGACGCTCAACAAGGTCAGGGCGGCGGCAACTACAACCAGTCCGCACCTC
GTCCACAGCAGTCGCGTCCACAACAGTCGGCGCCGCAGCAATCTGCACCTCAGCAGAACTACAACCAGCAGCCGCCACAA
CAGCGCGACTCGCGCCCAGCGCCGCAACAACAAGCGCCGCAGCCAGCTGCTGACTTTGATAGCTTTGATGATGATATTCC
GTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
55.208 |
100 |
0.564 |
| ssb | Glaesserella parasuis strain SC1401 |
47.09 |
100 |
0.473 |
| ssb | Neisseria meningitidis MC58 |
44.92 |
99.468 |
0.447 |
| ssb | Neisseria gonorrhoeae MS11 |
44.92 |
99.468 |
0.447 |