Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   BAY21_RS11550 Genome accession   NZ_CP016439
Coordinates   1367560..1367673 (-) Length   37 a.a.
NCBI ID   WP_418346451.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CS8     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1362560..1372673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAY21_RS10005 - 1363006..1363191 (+) 186 WP_231108740.1 hypothetical protein -
  BAY21_RS07285 (BAY21_07285) - 1363257..1364828 (-) 1572 WP_011226359.1 ATP-binding cassette domain-containing protein -
  BAY21_RS07290 (BAY21_07290) - 1364830..1366125 (-) 1296 WP_011226358.1 radical SAM/SPASM domain-containing protein -
  BAY21_RS07295 (BAY21_07295) - 1366474..1367337 (+) 864 WP_011226357.1 helix-turn-helix domain-containing protein -
  BAY21_RS11165 - 1367354..1367506 (-) 153 WP_415669522.1 DUF5966 family protein -
  BAY21_RS11550 prx 1367560..1367673 (-) 114 WP_418346451.1 hypothetical protein Regulator
  BAY21_RS07300 (BAY21_07300) - 1367647..1367886 (-) 240 Protein_1375 hypothetical protein -
  BAY21_RS07305 (BAY21_07305) - 1367886..1368476 (-) 591 WP_011226355.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein -
  BAY21_RS07310 (BAY21_07310) - 1368798..1369052 (+) 255 WP_231108741.1 hypothetical protein -
  BAY21_RS07315 (BAY21_07315) - 1369173..1369421 (+) 249 WP_231079886.1 GyrI-like domain-containing protein -
  BAY21_RS07320 (BAY21_07320) - 1369422..1370153 (+) 732 WP_011227447.1 pseudouridine synthase -
  BAY21_RS07325 (BAY21_07325) - 1370235..1370363 (+) 129 WP_002953363.1 DUF4044 domain-containing protein -
  BAY21_RS07330 (BAY21_07330) obgE 1370457..1371770 (+) 1314 WP_011681460.1 GTPase ObgE -
  BAY21_RS07335 (BAY21_07335) - 1371937..1372134 (+) 198 WP_002953361.1 hypothetical protein -

Sequence

Protein


Download         Length: 37 a.a.        Molecular weight: 4103.69 Da        Isoelectric Point: 4.0127

>NTDB_id=160317 BAY21_RS11550 WP_418346451.1 1367560..1367673(-) (prx) [Streptococcus thermophilus strain CS8]
MTLKGTTLSYVLPGEKVEPGEIVTEEDLKAVLEELRD

Nucleotide


Download         Length: 114 bp        

>NTDB_id=160317 BAY21_RS11550 WP_418346451.1 1367560..1367673(-) (prx) [Streptococcus thermophilus strain CS8]
GTGACGCTTAAAGGGACTACACTTAGTTATGTTTTGCCAGGAGAGAAAGTAGAACCTGGAGAAATAGTAACAGAGGAGGA
TTTAAAAGCTGTCCTTGAAGAATTGAGAGATTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

54.839

83.784

0.459
  prx Streptococcus pyogenes MGAS315

53.125

86.486

0.459
  prx Streptococcus pyogenes MGAS315

46.875

86.486

0.405
  prx Streptococcus pyogenes MGAS315

46.875

86.486

0.405