Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AQ980_RS01840 | Genome accession | NZ_CP013055 |
| Coordinates | 309441..309953 (+) | Length | 170 a.a. |
| NCBI ID | WP_000981966.1 | Uniprot ID | A0A0A3WKS9 |
| Organism | Bacillus thuringiensis strain YWC2-8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 304441..314953
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AQ980_RS01810 (AQ980_01860) | spo0J | 304889..305740 (+) | 852 | WP_001051829.1 | stage 0 sporulation protein Spo0J | - |
| AQ980_RS01815 (AQ980_01865) | yyaC | 305761..306357 (-) | 597 | WP_001020715.1 | spore protease YyaC | - |
| AQ980_RS01820 (AQ980_01870) | - | 306617..307498 (+) | 882 | WP_000365108.1 | mechanosensitive ion channel family protein | - |
| AQ980_RS01825 (AQ980_01875) | - | 307519..307716 (+) | 198 | WP_000435485.1 | DUF951 domain-containing protein | - |
| AQ980_RS01830 (AQ980_01880) | ychF | 307832..308932 (+) | 1101 | WP_000524667.1 | redox-regulated ATPase YchF | - |
| AQ980_RS01835 (AQ980_01885) | rpsF | 309124..309414 (+) | 291 | WP_001233778.1 | 30S ribosomal protein S6 | - |
| AQ980_RS01840 (AQ980_01890) | ssbA | 309441..309953 (+) | 513 | WP_000981966.1 | single-stranded DNA-binding protein | Machinery gene |
| AQ980_RS01845 (AQ980_01895) | rpsR | 309999..310232 (+) | 234 | WP_000918873.1 | 30S ribosomal protein S18 | - |
| AQ980_RS01850 (AQ980_01900) | - | 310313..311248 (+) | 936 | WP_000806422.1 | YybS family protein | - |
| AQ980_RS01855 (AQ980_01905) | - | 311327..313300 (+) | 1974 | WP_001113788.1 | DHH family phosphoesterase | - |
| AQ980_RS01860 (AQ980_01910) | rplI | 313297..313743 (+) | 447 | WP_000864228.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18494.29 Da Isoelectric Point: 4.9327
>NTDB_id=159479 AQ980_RS01840 WP_000981966.1 309441..309953(+) (ssbA) [Bacillus thuringiensis strain YWC2-8]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=159479 AQ980_RS01840 WP_000981966.1 309441..309953(+) (ssbA) [Bacillus thuringiensis strain YWC2-8]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.571 |
100 |
0.747 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
62.353 |
0.406 |
| ssb | Glaesserella parasuis strain SC1401 |
37.43 |
100 |
0.394 |