Detailed information
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | A9497_RS07955 | Genome accession | NZ_CP016026 |
| Coordinates | 1509592..1510254 (+) | Length | 220 a.a. |
| NCBI ID | WP_011680771.1 | Uniprot ID | - |
| Organism | Streptococcus thermophilus strain KLDS SM | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1504592..1515254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9497_RS07925 (A9497_07925) | - | 1504910..1505620 (+) | 711 | WP_011680767.1 | ABC transporter ATP-binding protein | - |
| A9497_RS10430 | - | 1505756..1506416 (+) | 661 | Protein_1482 | CBS and ACT domain-containing protein | - |
| A9497_RS07940 (A9497_07940) | cysK | 1506583..1507509 (-) | 927 | WP_011680768.1 | cysteine synthase A | - |
| A9497_RS07945 (A9497_07945) | - | 1507611..1508237 (-) | 627 | WP_011680769.1 | YigZ family protein | - |
| A9497_RS07950 (A9497_07950) | comFA/cflA | 1508292..1509611 (+) | 1320 | WP_024704193.1 | DEAD/DEAH box helicase | Machinery gene |
| A9497_RS07955 (A9497_07955) | comFC/cflB | 1509592..1510254 (+) | 663 | WP_011680771.1 | ComF family protein | Machinery gene |
| A9497_RS07960 (A9497_07960) | hpf | 1510333..1510881 (+) | 549 | WP_011680772.1 | ribosome hibernation-promoting factor, HPF/YfiA family | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 26051.42 Da Isoelectric Point: 8.9833
>NTDB_id=158924 A9497_RS07955 WP_011680771.1 1509592..1510254(+) (comFC/cflB) [Streptococcus thermophilus strain KLDS SM]
MKCLLCNEWIEPVAQLSDLIMFKQRREYSCEDCKAQFKKLGKARCSNCYKIIDGNSCFDCKIWAKKGYIPKHFAIYRYEE
NMKEYFSRYKFMGDYCLRKIFQQEIKANLKSFLKKGYILVPVPLSEERLEERGFNQVKGLLEGIPYKNIFEKREIEKQSS
RTREERLSQDNSFSLKKGIELPSKIIIIDDIYTTGSTLYQMVKLLEDLDVKEVLTFSLAR
MKCLLCNEWIEPVAQLSDLIMFKQRREYSCEDCKAQFKKLGKARCSNCYKIIDGNSCFDCKIWAKKGYIPKHFAIYRYEE
NMKEYFSRYKFMGDYCLRKIFQQEIKANLKSFLKKGYILVPVPLSEERLEERGFNQVKGLLEGIPYKNIFEKREIEKQSS
RTREERLSQDNSFSLKKGIELPSKIIIIDDIYTTGSTLYQMVKLLEDLDVKEVLTFSLAR
Nucleotide
Download Length: 663 bp
>NTDB_id=158924 A9497_RS07955 WP_011680771.1 1509592..1510254(+) (comFC/cflB) [Streptococcus thermophilus strain KLDS SM]
ATGAAGTGTCTACTATGTAATGAATGGATTGAACCAGTAGCTCAATTAAGTGATTTAATTATGTTTAAACAAAGAAGAGA
GTATTCTTGTGAAGATTGTAAAGCTCAATTTAAAAAGCTTGGGAAGGCGAGATGTTCAAATTGTTATAAAATAATAGATG
GAAATAGTTGCTTTGATTGCAAAATTTGGGCGAAAAAAGGCTATATTCCAAAACATTTTGCCATTTATCGTTATGAAGAA
AACATGAAAGAGTATTTTAGTCGCTATAAATTTATGGGAGATTATTGTCTTAGAAAAATATTTCAACAAGAAATTAAAGC
CAATTTAAAGTCTTTTTTAAAGAAAGGTTATATCTTAGTACCTGTCCCCTTGTCGGAAGAACGCCTGGAAGAGAGAGGAT
TCAATCAAGTTAAAGGATTACTAGAGGGAATCCCCTATAAAAACATTTTTGAAAAAAGAGAGATCGAGAAGCAATCCTCG
AGAACACGCGAAGAGCGGTTAAGTCAAGATAATTCTTTCAGTTTGAAGAAAGGTATTGAGCTACCAAGTAAGATCATCAT
AATCGATGATATTTACACAACAGGATCTACCCTGTATCAAATGGTCAAACTATTAGAGGATTTAGATGTCAAAGAAGTTT
TGACATTTTCCTTAGCTAGATAA
ATGAAGTGTCTACTATGTAATGAATGGATTGAACCAGTAGCTCAATTAAGTGATTTAATTATGTTTAAACAAAGAAGAGA
GTATTCTTGTGAAGATTGTAAAGCTCAATTTAAAAAGCTTGGGAAGGCGAGATGTTCAAATTGTTATAAAATAATAGATG
GAAATAGTTGCTTTGATTGCAAAATTTGGGCGAAAAAAGGCTATATTCCAAAACATTTTGCCATTTATCGTTATGAAGAA
AACATGAAAGAGTATTTTAGTCGCTATAAATTTATGGGAGATTATTGTCTTAGAAAAATATTTCAACAAGAAATTAAAGC
CAATTTAAAGTCTTTTTTAAAGAAAGGTTATATCTTAGTACCTGTCCCCTTGTCGGAAGAACGCCTGGAAGAGAGAGGAT
TCAATCAAGTTAAAGGATTACTAGAGGGAATCCCCTATAAAAACATTTTTGAAAAAAGAGAGATCGAGAAGCAATCCTCG
AGAACACGCGAAGAGCGGTTAAGTCAAGATAATTCTTTCAGTTTGAAGAAAGGTATTGAGCTACCAAGTAAGATCATCAT
AATCGATGATATTTACACAACAGGATCTACCCTGTATCAAATGGTCAAACTATTAGAGGATTTAGATGTCAAAGAAGTTT
TGACATTTTCCTTAGCTAGATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus mitis NCTC 12261 |
45.495 |
100 |
0.459 |
| comFC/cflB | Streptococcus mitis SK321 |
45.045 |
100 |
0.455 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus pneumoniae D39 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus pneumoniae R6 |
44.144 |
100 |
0.445 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
44.144 |
100 |
0.445 |