Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACT75_RS05535 | Genome accession | NZ_CP012959 |
| Coordinates | 1149561..1150046 (-) | Length | 161 a.a. |
| NCBI ID | WP_014702365.1 | Uniprot ID | A0A142G044 |
| Organism | Aggregatibacter actinomycetemcomitans strain 624 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1144561..1155046
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACT75_RS13080 (ACT75_05515) | - | 1146065..1146253 (-) | 189 | WP_005543949.1 | hypothetical protein | - |
| ACT75_RS05525 (ACT75_05520) | - | 1146420..1148591 (+) | 2172 | WP_005543943.1 | YecA family protein | - |
| ACT75_RS05530 (ACT75_05525) | - | 1148805..1149371 (+) | 567 | WP_005543941.1 | efflux RND transporter permease subunit | - |
| ACT75_RS05535 (ACT75_05530) | ssb | 1149561..1150046 (-) | 486 | WP_014702365.1 | single-stranded DNA-binding protein | Machinery gene |
| ACT75_RS05540 (ACT75_05535) | uvrA | 1150216..1153047 (+) | 2832 | WP_005543937.1 | excinuclease ABC subunit UvrA | - |
| ACT75_RS05545 (ACT75_05540) | - | 1153125..1153499 (+) | 375 | WP_061866548.1 | transposase | - |
| ACT75_RS12440 | - | 1153541..1153798 (+) | 258 | WP_145916692.1 | IS3 family transposase | - |
| ACT75_RS05550 (ACT75_05545) | - | 1153792..1154301 (+) | 510 | WP_235605831.1 | IS3 family transposase | - |
| ACT75_RS05555 (ACT75_05550) | - | 1154378..1154788 (-) | 411 | WP_005589530.1 | MerR family transcriptional regulator | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 17972.83 Da Isoelectric Point: 5.3111
>NTDB_id=158603 ACT75_RS05535 WP_014702365.1 1149561..1150046(-) (ssb) [Aggregatibacter actinomycetemcomitans strain 624]
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVLQMLDSRADRQSGGNYAPAAVAQPSYPSQQQSAPRSAPASKPTAEAPMDNFDDDIP
F
MAGVNKVIIVGNLGNDPEIRTMPNGEAVANITVATSESWNDKNTGERREVTEWHRIVFYRRQAEVAGEYLRKGSKVYVEG
RLRTRKWQDQNGQDRYTTEIQGDVLQMLDSRADRQSGGNYAPAAVAQPSYPSQQQSAPRSAPASKPTAEAPMDNFDDDIP
F
Nucleotide
Download Length: 486 bp
>NTDB_id=158603 ACT75_RS05535 WP_014702365.1 1149561..1150046(-) (ssb) [Aggregatibacter actinomycetemcomitans strain 624]
ATGGCTGGAGTAAATAAAGTGATTATCGTCGGTAATTTGGGTAACGATCCTGAAATCCGCACCATGCCGAATGGCGAAGC
CGTTGCCAACATTACCGTTGCCACCAGTGAAAGCTGGAATGACAAAAATACCGGCGAACGCCGCGAAGTCACTGAATGGC
ACCGTATCGTATTTTATCGCCGCCAGGCGGAAGTGGCGGGGGAATACCTGCGTAAAGGCTCGAAAGTCTATGTCGAAGGA
CGCTTAAGAACCCGTAAATGGCAGGATCAAAACGGTCAAGATCGCTACACCACCGAAATCCAAGGCGACGTTTTACAAAT
GTTAGACAGCCGTGCCGATCGCCAATCCGGCGGAAACTACGCACCGGCTGCAGTTGCCCAACCAAGTTATCCAAGCCAAC
AACAAAGCGCCCCACGCAGCGCGCCGGCAAGTAAACCTACCGCCGAAGCGCCGATGGATAATTTTGATGATGATATTCCG
TTCTGA
ATGGCTGGAGTAAATAAAGTGATTATCGTCGGTAATTTGGGTAACGATCCTGAAATCCGCACCATGCCGAATGGCGAAGC
CGTTGCCAACATTACCGTTGCCACCAGTGAAAGCTGGAATGACAAAAATACCGGCGAACGCCGCGAAGTCACTGAATGGC
ACCGTATCGTATTTTATCGCCGCCAGGCGGAAGTGGCGGGGGAATACCTGCGTAAAGGCTCGAAAGTCTATGTCGAAGGA
CGCTTAAGAACCCGTAAATGGCAGGATCAAAACGGTCAAGATCGCTACACCACCGAAATCCAAGGCGACGTTTTACAAAT
GTTAGACAGCCGTGCCGATCGCCAATCCGGCGGAAACTACGCACCGGCTGCAGTTGCCCAACCAAGTTATCCAAGCCAAC
AACAAAGCGCCCCACGCAGCGCGCCGGCAAGTAAACCTACCGCCGAAGCGCCGATGGATAATTTTGATGATGATATTCCG
TTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
70.556 |
100 |
0.789 |
| ssb | Vibrio cholerae strain A1552 |
57.803 |
100 |
0.621 |
| ssb | Neisseria gonorrhoeae MS11 |
47.126 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
45.763 |
100 |
0.503 |