Detailed information NTG0158216

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: APQ97_RS06280
• Genome accession: NZ_CP012911
• Coordinates: 1280493..1281434 (-)
• Length: 313 a.a.
• NCBI ID: WP_002938107.1
• Uniprot ID: A0A142UMZ0
• Organism: Streptococcus suis strain NSUI060
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1275493..1286434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APQ97_RS06255 (APQ97_06245)	prsA	1275597..1276598 (-)	1002	WP_002938100.1	peptidylprolyl isomerase PrsA	-
APQ97_RS06260 (APQ97_06250)	-	1276659..1277378 (-)	720	WP_009910106.1	O-methyltransferase	-
APQ97_RS06265 (APQ97_06255)	-	1277453..1278001 (-)	549	WP_002938103.1	DUF6630 family protein	-
APQ97_RS06270 (APQ97_06260)	-	1278017..1278457 (-)	441	WP_002938105.1	hypothetical protein	-
APQ97_RS06275 (APQ97_06265)	pepF	1278459..1280261 (-)	1803	WP_002938106.1	oligoendopeptidase F	Regulator
APQ97_RS06280 (APQ97_06270)	coiA	1280493..1281434 (-)	942	WP_002938107.1	competence protein CoiA family protein	Machinery gene
APQ97_RS06285 (APQ97_06275)	metG	1281498..1283501 (-)	2004	WP_002938113.1	methionine--tRNA ligase	-
APQ97_RS06290 (APQ97_06280)	-	1283655..1284248 (+)	594	WP_002938116.1	DUF1361 domain-containing protein	-
APQ97_RS06295 (APQ97_06285)	-	1284549..1285586 (+)	1038	WP_002938119.1	3-deoxy-7-phosphoheptulonate synthase	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36361.92 Da
• Isoelectric Point: 7.9421

>NTDB_id=158216 APQ97_RS06280 WP_002938107.1 1280493..1281434(-) (coiA) [Streptococcus suis strain NSUI060]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQLRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLDILRLPFAKQALSHLTFPLDRDLPRYIAQQLYYRSPNWL
TLQAESYSRGENLLTKTAEEWYPHIRLPRSAIGFAQIQKDLTLVYQDFDQYYGNIEDKQKQVLYPPIIYRKPM

Nucleotide

• Length: 942 bp

>NTDB_id=158216 APQ97_RS06280 WP_002938107.1 1280493..1281434(-) (coiA) [Streptococcus suis strain NSUI060]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCTTGTCC
AGGTTGTGGAGGGCTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCATTTTGCCCATGTAACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCAGCCCAGCATCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGGCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTCCA
ATGTTCCAGTCTGCCCATTTCTCGTTTGCAGCTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGACATCTTGCGTCTGCCTTTTGCCAAGCAAGCTTTAT
CGCATCTTACTTTCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAGATCCCCCAATTGGTTA
ACCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATTTGCTGACAAAGACGGCAGAAGAATGGTACCCACATATCCGTCT
ACCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAACCTTAGTTTATCAGGATTTTGACCAGTATTACGGCA
ATATTGAAGACAAGCAGAAACAGGTTCTATATCCACCTATAATTTATAGAAAACCAATGTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-220)

3D structure

• AlphaFold DB: A0A142UMZ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	52.885	99.681	0.527
coiA	Streptococcus pneumoniae TIGR4	50.962	99.681	0.508
coiA	Streptococcus pneumoniae Rx1	50.962	99.681	0.508
coiA	Streptococcus pneumoniae D39	50.962	99.681	0.508
coiA	Streptococcus pneumoniae R6	50.962	99.681	0.508
coiA	Lactococcus lactis subsp. cremoris KW2	41.562	100	0.425