Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   AOY20_RS13955 Genome accession   NZ_CP012808
Coordinates   2959618..2962020 (-) Length   800 a.a.
NCBI ID   WP_054582438.1    Uniprot ID   A0A0N9W478
Organism   Acinetobacter equi strain 114     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2954618..2967020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOY20_RS13930 (AOY20_13930) purM 2954959..2956029 (+) 1071 WP_054582433.1 phosphoribosylformylglycinamidine cyclo-ligase -
  AOY20_RS13935 (AOY20_13935) purN 2956036..2956665 (+) 630 WP_054582434.1 phosphoribosylglycinamide formyltransferase -
  AOY20_RS13940 (AOY20_13940) - 2956728..2957531 (-) 804 WP_054582435.1 alpha/beta fold hydrolase -
  AOY20_RS13945 (AOY20_13945) sppA 2957528..2958553 (-) 1026 WP_054582436.1 signal peptide peptidase SppA -
  AOY20_RS13950 (AOY20_13950) - 2958673..2959608 (+) 936 WP_054582437.1 lysophospholipid acyltransferase family protein -
  AOY20_RS13955 (AOY20_13955) comA/comEC 2959618..2962020 (-) 2403 WP_054582438.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  AOY20_RS13960 (AOY20_13960) lolD 2962104..2962784 (-) 681 WP_054582439.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  AOY20_RS13965 (AOY20_13965) - 2962777..2964012 (-) 1236 WP_054582440.1 lipoprotein-releasing ABC transporter permease subunit -
  AOY20_RS13970 (AOY20_13970) - 2964417..2965316 (-) 900 WP_054582441.1 DMT family transporter -
  AOY20_RS13975 (AOY20_13975) - 2965327..2965797 (-) 471 WP_054582442.1 YaiI/YqxD family protein -
  AOY20_RS13980 (AOY20_13980) - 2966067..2966987 (+) 921 WP_054582443.1 hypothetical protein -

Sequence


Protein


Download         Length: 800 a.a.        Molecular weight: 92575.08 Da        Isoelectric Point: 8.4696

>NTDB_id=157769 AOY20_RS13955 WP_054582438.1 2959618..2962020(-) (comA/comEC) [Acinetobacter equi strain 114]
MFYFIAFGWIIGIACMGQAFTSILELSLPVNILLFIFLFLELIFYRKISTYLFKFLCCSSAFILSLVLGLNYADHHLVQR
LELREKQVEDVTVLIYVKHISELRENSFQQKIEVLNRKSKPVQWFSSVELDQGDFELGKYFRVSGKLRPAHGYATDGSFD
IEKWYIQQNIMGNLKVSTFEEISPQEVQQFGYMQYVKQQDTWLSQSLVWIEKQRLLIRQFIQIQPIRHKGLTLALLTGDE
SLLDKNLEQQFQRFGMSHLLAISGPHVVIFAVIICWLIQYLIDRFKPDIYLKIPRQYLLIYPFLSCVIIYCAYVGFEIPA
LRTLLVCILGSLFILLKQSIKPLSLLLLSACILLFFDPFSVLSAAFWLSYGACFILLRIYQTIQNDKLEQASFYEKCKHY
IGALIESQWKIFIALFPLMIIFFNQISWITPLSNLFAIPWIGLIIVPLDIFGGISYFFFKPLSTIIFQLNDLMLSLLLHF
IQLLDDIFNPQLYPIYLNIWALAGLILALIILFMPKGIVPRAWSILCIIPIFLGQQSSETFEFVLLDVGQGQSIFIRNEN
KKMLLDTGGSFDEDKFSIGEQVILPFLSIKNSRKLDILILSHLDQDHSGAYFKIKNQLYVQQLYSNEILEDQDHNQLCER
GKKIDLGSNIDIQVLLPHIEDLTKKPFNKNEMSCVIYLQLAQAYPYQNYLFMGDAGWETEFKLLQLYPNLKVDVLVLGHH
GSQHSSAYDFLKNIRPKIALISAGFDNRYGHPSGKTIQRLKHLNIPYLSTADVGTIKIKKNKTGQTGLRVLRNQKKWLKK

Nucleotide


Download         Length: 2403 bp        

>NTDB_id=157769 AOY20_RS13955 WP_054582438.1 2959618..2962020(-) (comA/comEC) [Acinetobacter equi strain 114]
ATGTTTTATTTCATTGCATTCGGTTGGATTATTGGTATTGCTTGTATGGGGCAGGCATTTACTTCAATTTTAGAGCTATC
GCTCCCTGTTAATATTCTTCTATTTATTTTTCTTTTTTTAGAATTGATATTTTATCGAAAAATAAGTACATATCTGTTTA
AGTTCTTATGCTGTTCAAGCGCATTTATTTTAAGTCTTGTTCTAGGGTTAAATTATGCAGATCATCATTTAGTGCAAAGG
CTGGAATTAAGAGAAAAGCAGGTCGAAGACGTTACTGTTTTAATTTATGTTAAGCATATTTCTGAATTAAGAGAAAATTC
CTTCCAGCAAAAAATAGAAGTATTGAATAGAAAGTCTAAACCTGTTCAGTGGTTTTCATCTGTTGAATTAGATCAAGGTG
ATTTTGAGCTGGGCAAGTATTTTCGTGTATCAGGAAAGCTTAGACCAGCGCATGGTTATGCGACAGATGGTAGCTTTGAT
ATAGAAAAATGGTACATCCAGCAGAATATTATGGGAAATTTAAAAGTTTCTACATTTGAAGAAATTTCCCCACAAGAAGT
TCAACAGTTCGGTTATATGCAATATGTAAAACAGCAAGATACATGGTTAAGTCAAAGTTTGGTTTGGATTGAAAAGCAAC
GGTTGTTGATTAGACAATTTATTCAGATACAACCAATACGTCATAAAGGTTTGACTTTAGCTTTATTAACTGGCGATGAA
AGTCTTTTAGATAAAAACTTAGAACAACAATTTCAGCGATTTGGTATGAGTCATCTTTTGGCTATTTCAGGTCCTCATGT
TGTTATTTTTGCGGTTATAATTTGCTGGTTAATTCAATATTTAATTGATCGCTTTAAGCCCGATATTTATTTAAAAATTC
CAAGACAGTATTTACTCATTTATCCATTCTTGAGTTGTGTCATTATTTATTGTGCTTATGTTGGATTTGAAATTCCTGCT
TTAAGAACCTTGTTAGTATGTATCTTGGGAAGCTTATTTATTTTATTAAAGCAATCGATTAAACCTTTATCTTTATTACT
TTTGAGTGCTTGTATACTTTTATTTTTTGATCCTTTCAGTGTTTTATCTGCTGCATTTTGGCTATCTTATGGTGCTTGTT
TTATTTTATTAAGAATTTATCAAACCATTCAAAATGACAAGTTAGAACAAGCTTCATTTTATGAAAAATGCAAACACTAT
ATTGGAGCTTTAATAGAGTCTCAATGGAAAATATTTATTGCATTATTTCCATTAATGATCATCTTTTTTAATCAAATTTC
CTGGATTACGCCATTAAGTAATTTGTTTGCAATACCTTGGATTGGTTTAATTATTGTACCTTTAGATATTTTTGGAGGTA
TAAGCTATTTCTTTTTTAAACCTTTAAGCACAATCATATTTCAATTGAATGATTTGATGTTGTCATTATTATTACATTTC
ATCCAATTATTAGATGATATTTTTAATCCACAGTTATATCCGATTTACTTAAATATTTGGGCATTAGCTGGACTCATTTT
AGCTTTAATTATTTTATTTATGCCCAAAGGAATTGTGCCTAGAGCATGGAGTATTTTGTGTATCATTCCAATTTTTTTAG
GGCAGCAATCATCTGAAACTTTTGAATTTGTATTGTTGGATGTTGGACAAGGACAATCTATTTTTATTCGGAATGAGAAT
AAAAAAATGTTGTTAGATACAGGTGGAAGTTTTGATGAAGATAAGTTTAGTATTGGTGAGCAAGTTATTTTGCCATTTTT
GTCTATAAAAAACTCAAGAAAACTAGATATTTTAATTTTAAGTCATTTAGACCAAGACCATAGTGGGGCATATTTTAAAA
TTAAAAATCAATTGTATGTTCAGCAGTTATATTCAAACGAGATTCTTGAAGATCAAGACCATAATCAACTTTGTGAACGA
GGGAAAAAAATAGATTTAGGTTCGAATATTGATATTCAAGTACTATTACCACATATCGAAGATTTAACTAAAAAACCATT
TAATAAAAATGAAATGTCATGTGTCATTTATTTGCAATTGGCACAAGCTTATCCATACCAAAACTATTTATTCATGGGGG
ATGCTGGATGGGAAACTGAATTTAAGCTTTTACAGTTATATCCGAATTTAAAAGTAGATGTTTTAGTTTTGGGACATCAT
GGGAGTCAACATAGTTCTGCTTATGATTTTTTGAAGAATATTCGTCCTAAAATTGCTTTAATTTCAGCAGGATTTGACAA
TCGTTATGGACATCCAAGTGGAAAAACAATTCAAAGGCTTAAGCATTTAAATATTCCATATTTATCTACAGCAGATGTAG
GAACTATTAAAATTAAGAAAAATAAAACTGGTCAAACGGGTCTGAGAGTATTAAGAAATCAAAAAAAATGGTTAAAGAAA
TAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0N9W478

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

47.842

100

0.485

  comA/comEC Acinetobacter baumannii strain A118

47.854

99

0.474

  comA/comEC Acinetobacter baumannii D1279779

47.355

99.25

0.47


Multiple sequence alignment