Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   AOY20_RS03235 Genome accession   NZ_CP012808
Coordinates   686628..687755 (+) Length   375 a.a.
NCBI ID   WP_054580526.1    Uniprot ID   -
Organism   Acinetobacter equi strain 114     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 681628..692755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOY20_RS03215 (AOY20_03215) - 682171..684231 (-) 2061 WP_054580522.1 TonB-dependent copper receptor -
  AOY20_RS03220 (AOY20_03220) - 684300..684725 (-) 426 WP_054580523.1 DUF2946 family protein -
  AOY20_RS03225 (AOY20_03225) def 684814..685338 (-) 525 WP_054580524.1 peptide deformylase -
  AOY20_RS03230 (AOY20_03230) tsaP 685457..686614 (+) 1158 WP_054580525.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AOY20_RS03235 (AOY20_03235) dprA 686628..687755 (+) 1128 WP_054580526.1 DNA-processing protein DprA Machinery gene
  AOY20_RS03240 (AOY20_03240) - 687800..688369 (+) 570 WP_054580527.1 L-threonylcarbamoyladenylate synthase -
  AOY20_RS03245 (AOY20_03245) - 688829..689719 (-) 891 WP_054580528.1 DMT family transporter -
  AOY20_RS03250 (AOY20_03250) - 689982..690524 (+) 543 WP_054580529.1 glutathione peroxidase -
  AOY20_RS03255 (AOY20_03255) - 690687..691262 (+) 576 WP_081403413.1 hypothetical protein -
  AOY20_RS15115 (AOY20_03260) adhP 691316..692350 (-) 1035 Protein_623 alcohol dehydrogenase AdhP -

Sequence


Protein


Download         Length: 375 a.a.        Molecular weight: 42995.27 Da        Isoelectric Point: 7.3151

>NTDB_id=157748 AOY20_RS03235 WP_054580526.1 686628..687755(+) (dprA) [Acinetobacter equi strain 114]
MLDHLSQHQINSISLWYVVQHSLPSFYKIQNYFKNLNDALQPQQITTWQNLGLHKNHIERFKQLQNIETQKHLQKIFYTI
QQYCDFVLTDQDHLYPTQLLPYEDRPPILFGQGNIQALLQPQIAIVGSRKATQYGLQITYDFAHYLSHQGFYITSGLAQG
IDEAAHQGSLKNQRTIAVMGTGIDQKYPIQNLKLRQEILIQQGTIITEFLPFTKPLQHNFPRRNRIVSGLSLGVLITEAS
LNSGSLITAKLAAEQGRSIFVTPGHIYNESHRGCHSLIREGAILVDHPEQIIEDLALPIQWHHQKIQSSLTQENLKIPEH
LLALYQQLDWNGQNIDQLATHLKVDIPILTSHLMELELLGICMQQSGLYLRCRSI

Nucleotide


Download         Length: 1128 bp        

>NTDB_id=157748 AOY20_RS03235 WP_054580526.1 686628..687755(+) (dprA) [Acinetobacter equi strain 114]
ATGTTGGACCATTTATCTCAGCATCAAATAAATAGCATTAGTTTGTGGTATGTGGTTCAGCATTCATTACCGAGTTTTTA
TAAAATCCAAAACTATTTTAAAAATCTAAATGATGCCCTTCAACCTCAACAAATCACGACATGGCAAAATTTAGGGCTTC
ATAAAAACCATATTGAAAGATTTAAACAACTACAAAACATAGAAACACAAAAGCATCTTCAAAAAATTTTCTACACTATT
CAACAATATTGTGATTTTGTTCTAACAGATCAAGACCACCTCTATCCTACGCAATTACTTCCTTATGAGGACAGACCACC
TATTTTATTTGGACAAGGTAATATTCAAGCACTGTTGCAACCACAAATAGCCATTGTTGGAAGCCGTAAAGCAACTCAAT
ATGGACTTCAAATTACTTATGATTTTGCTCATTATTTAAGTCATCAAGGCTTTTATATTACAAGTGGATTAGCGCAAGGT
ATTGATGAGGCAGCTCACCAAGGTTCTCTCAAAAATCAAAGAACGATTGCTGTTATGGGTACTGGAATTGATCAAAAATA
TCCCATTCAAAATTTAAAATTGCGACAAGAAATACTTATTCAACAAGGAACCATCATTACTGAATTTTTACCATTTACAA
AACCATTACAACACAACTTTCCAAGACGAAACCGTATTGTAAGTGGATTAAGTTTAGGTGTACTCATCACAGAAGCCAGT
TTAAATAGTGGATCATTAATTACAGCAAAGCTTGCTGCAGAACAAGGCCGTAGTATTTTTGTCACACCAGGACATATTTA
TAATGAATCTCATAGAGGTTGCCATTCACTTATTCGAGAAGGTGCTATTTTAGTAGATCATCCTGAACAAATTATTGAAG
ATTTAGCACTTCCTATCCAATGGCACCACCAAAAAATACAATCTTCATTAACACAAGAAAATCTTAAAATTCCTGAACAT
TTATTAGCTTTATATCAACAGCTAGACTGGAATGGACAAAATATTGATCAATTAGCTACTCATTTAAAAGTAGATATTCC
TATCTTAACAAGTCACTTAATGGAATTAGAACTATTAGGAATATGTATGCAACAATCGGGTCTATATTTACGTTGTCGTT
CTATTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

62.234

100

0.624

  dprA Acinetobacter baumannii D1279779

61.804

100

0.621

  dprA Acinetobacter baylyi ADP1

58.53

100

0.595


Multiple sequence alignment