Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   SanJ4211_RS03070 Genome accession   NZ_CP012805
Coordinates   595135..596166 (+) Length   343 a.a.
NCBI ID   WP_057489589.1    Uniprot ID   A0AAP6BQJ9
Organism   Streptococcus anginosus strain J4211     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 590135..601166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS03045 (SanJ4211_0581) - 590334..590648 (+) 315 WP_003073302.1 PTS cellobiose transporter subunit IIB -
  SanJ4211_RS03050 (SanJ4211_0582) - 590704..592695 (+) 1992 WP_057489588.1 BglG family transcription antiterminator -
  SanJ4211_RS03055 (SanJ4211_0583) - 592708..593025 (+) 318 WP_021001470.1 PTS cellobiose transporter subunit IIA -
  SanJ4211_RS03060 (SanJ4211_0584) - 593033..593554 (+) 522 WP_003025381.1 hypothetical protein -
  SanJ4211_RS03065 (SanJ4211_0585) celB 593594..594937 (+) 1344 WP_021001471.1 PTS cellobiose transporter subunit IIC -
  SanJ4211_RS03070 (SanJ4211_0586) coiA 595135..596166 (+) 1032 WP_057489589.1 competence protein CoiA Machinery gene
  SanJ4211_RS03075 (SanJ4211_0587) pepF 596118..597920 (+) 1803 WP_021001473.1 oligoendopeptidase F Regulator
  SanJ4211_RS03080 (SanJ4211_0588) - 597922..598605 (+) 684 WP_057489590.1 O-methyltransferase -
  SanJ4211_RS03085 (SanJ4211_0589) prsA 598712..599650 (+) 939 WP_003025374.1 peptidylprolyl isomerase PrsA -
  SanJ4211_RS03090 (SanJ4211_0590) - 599788..600357 (+) 570 WP_080553209.1 LURP-one-related/scramblase family protein -

Sequence


Protein


Download         Length: 343 a.a.        Molecular weight: 40842.32 Da        Isoelectric Point: 9.5834

>NTDB_id=157695 SanJ4211_RS03070 WP_057489589.1 595135..596166(+) (coiA) [Streptococcus anginosus strain J4211]
MLMACQENGKMLNAVEDTVNPLDRFLCPACKEAVRFKNGKVMRPHFAHISLKECHFYTENESAEHLNLKAVLFTWARKSN
HAIQVEAYLPKLQQIADLLVEKQIVLEVQCSSLSQKRLKERTESYRQHGYRVLWLLGKKLWLKNTLTNLQKDFLYFSQNM
GFHLWELDEQKQLLRLKYLIHEDLHGKVQYKEKSFAFGKGKLLDIFRQPFCKQEMTSFLAKEDKNICRYVRQQLYYQQPK
WMKWQAELYQTGDNLLTKTASDFYPQVQPVRSSSFCQIFQDLTPYYQQFSAYYEKEKNKNLQILYPPAFYAKIFGNIYDK
IGKTEEILWQNKEMKLKKNTLGT

Nucleotide


Download         Length: 1032 bp        

>NTDB_id=157695 SanJ4211_RS03070 WP_057489589.1 595135..596166(+) (coiA) [Streptococcus anginosus strain J4211]
ATGTTAATGGCTTGTCAGGAAAACGGAAAAATGCTAAATGCTGTGGAAGATACGGTAAATCCGTTGGATAGGTTTCTCTG
CCCGGCTTGTAAGGAAGCGGTGCGATTTAAGAATGGCAAGGTGATGCGACCGCACTTTGCTCATATTTCTTTAAAAGAAT
GTCATTTTTATACGGAAAATGAAAGTGCAGAACACTTAAATCTGAAAGCTGTTTTGTTTACTTGGGCTAGAAAGTCCAAT
CATGCGATTCAAGTGGAAGCGTATTTACCTAAATTGCAACAAATTGCAGATCTGTTAGTAGAGAAACAAATTGTGCTTGA
AGTTCAGTGTAGCTCACTTAGTCAAAAACGCTTAAAAGAGCGTACGGAAAGTTATCGTCAGCATGGCTATCGCGTTCTTT
GGCTCTTGGGAAAGAAACTTTGGCTGAAAAATACTTTGACCAATTTACAAAAGGATTTTCTCTATTTCAGTCAAAATATG
GGCTTTCATCTGTGGGAATTGGACGAACAAAAACAGCTTTTGAGGCTTAAATACTTGATTCATGAAGATTTGCATGGCAA
GGTTCAGTATAAGGAGAAAAGTTTTGCTTTTGGTAAAGGAAAACTTTTAGACATCTTTCGTCAGCCATTCTGCAAGCAGG
AAATGACGAGTTTTCTGGCAAAAGAAGATAAAAATATTTGCCGTTATGTGCGCCAGCAGCTCTACTATCAGCAGCCCAAA
TGGATGAAATGGCAGGCAGAATTGTATCAAACGGGTGATAATTTATTGACCAAAACGGCTAGTGACTTTTACCCGCAAGT
CCAACCTGTTCGTTCCAGCTCTTTCTGTCAGATTTTTCAGGATCTCACGCCTTATTACCAGCAATTTTCAGCTTATTATG
AAAAAGAAAAAAATAAAAATCTCCAAATTCTCTATCCTCCAGCTTTTTATGCAAAGATTTTTGGCAATATTTATGATAAA
ATAGGAAAGACGGAGGAAATTTTATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

53.822

91.545

0.493

  coiA Streptococcus pneumoniae Rx1

53.185

91.545

0.487

  coiA Streptococcus pneumoniae D39

53.185

91.545

0.487

  coiA Streptococcus pneumoniae R6

53.185

91.545

0.487

  coiA Streptococcus pneumoniae TIGR4

52.866

91.545

0.484

  coiA Lactococcus lactis subsp. cremoris KW2

43.827

94.461

0.414


Multiple sequence alignment