Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   SanJ4211_RS02355 Genome accession   NZ_CP012805
Coordinates   452894..453553 (-) Length   219 a.a.
NCBI ID   WP_049516828.1    Uniprot ID   A0AAP6BQ13
Organism   Streptococcus anginosus strain J4211     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 447894..458553
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS02335 (SanJ4211_0436) - 448938..449504 (+) 567 WP_021001376.1 YutD family protein -
  SanJ4211_RS02340 (SanJ4211_0437) rlmN 449538..450620 (+) 1083 WP_021001377.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  SanJ4211_RS02345 (SanJ4211_0438) - 450613..451143 (+) 531 WP_003025737.1 VanZ family protein -
  SanJ4211_RS02350 (SanJ4211_0439) trpB 451528..452724 (+) 1197 WP_021001378.1 tryptophan synthase subunit beta -
  SanJ4211_RS02355 (SanJ4211_0440c) cclA/cilC 452894..453553 (-) 660 WP_049516828.1 prepilin peptidase Machinery gene
  SanJ4211_RS02360 (SanJ4211_0441) - 453707..454234 (+) 528 WP_049516827.1 Dps family protein -
  SanJ4211_RS02365 (SanJ4211_0442) - 454508..454732 (+) 225 WP_003025724.1 YqgQ family protein -
  SanJ4211_RS02370 (SanJ4211_0443) - 454726..455106 (+) 381 WP_024052074.1 rhodanese-like domain-containing protein -
  SanJ4211_RS02375 (SanJ4211_0444c) - 455127..455852 (-) 726 WP_003025719.1 16S rRNA pseudouridine(516) synthase -
  SanJ4211_RS02380 (SanJ4211_0445) typA 456030..457871 (+) 1842 WP_057489582.1 translational GTPase TypA -
  SanJ4211_RS02385 (SanJ4211_0446) - 457936..458220 (+) 285 WP_003025714.1 DUF3165 family protein -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24779.26 Da        Isoelectric Point: 8.2306

>NTDB_id=157690 SanJ4211_RS02355 WP_049516828.1 452894..453553(-) (cclA/cilC) [Streptococcus anginosus strain J4211]
MIHFYFFLVGSIVASFLGLVVDRFPEQSIIVPSSHCNACGQKLAPRDLVPVLSQLINRLRCRFCQSKIPIRYLILELVGS
LLFLATSLSYLTISQLVLLIMGITLALYDQREQEYPILIWLFFHLLLLFLVGFNLLMTIFLALGILAHFVDLRIGAGDFL
FLASCSTVFKLTEILWLIQIASLVGLCLFCLKKRKDRIAFVPCLLIGVIVLLLCELLLQ

Nucleotide


Download         Length: 660 bp        

>NTDB_id=157690 SanJ4211_RS02355 WP_049516828.1 452894..453553(-) (cclA/cilC) [Streptococcus anginosus strain J4211]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGCATTGTGGCTTCTTTTTTAGGGCTGGTTGTTGATCGCTTTCCTGAACA
GTCCATTATCGTTCCTTCCAGTCATTGTAATGCTTGTGGGCAGAAATTAGCACCTCGTGATTTAGTCCCTGTCCTTTCAC
AGCTTATCAATCGACTGCGCTGTCGGTTTTGTCAGTCAAAAATTCCCATTCGCTACTTGATATTAGAGTTGGTAGGTAGT
TTACTCTTTCTCGCAACTTCCTTAAGCTACTTAACTATCAGCCAACTTGTCTTGCTCATAATGGGAATTACACTAGCTCT
TTATGATCAAAGAGAACAGGAATATCCTATCCTCATTTGGTTGTTCTTTCATCTTCTTCTCCTATTTTTGGTAGGTTTTA
ATCTTCTAATGACTATTTTTTTAGCTCTTGGAATTTTGGCTCATTTCGTTGATTTGCGTATCGGTGCAGGAGATTTTCTT
TTTCTAGCTTCTTGTTCAACTGTTTTCAAGTTGACAGAGATTCTTTGGCTGATTCAAATTGCCAGCTTAGTGGGCTTATG
TCTCTTTTGCTTAAAAAAGAGAAAAGACAGGATAGCTTTCGTTCCCTGTCTTTTGATTGGAGTGATTGTTCTGCTTTTAT
GCGAACTGTTGCTTCAATAA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

57.339

99.543

0.571
  cclA/cilC Streptococcus mitis NCTC 12261

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae Rx1

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae D39

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae R6

56.881

99.543

0.566
  cclA/cilC Streptococcus pneumoniae TIGR4

55.963

99.543

0.557

Multiple sequence alignment