Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FORC17_RS01845 | Genome accession | NZ_CP012739 |
| Coordinates | 386968..387615 (-) | Length | 215 a.a. |
| NCBI ID | WP_011079388.1 | Uniprot ID | Q7MHB7 |
| Organism | Vibrio vulnificus strain FORC_017 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 381968..392615
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC17_RS01835 (FORC17_0321) | uvrA | 382946..385768 (-) | 2823 | WP_013571056.1 | excinuclease ABC subunit UvrA | - |
| FORC17_RS01840 (FORC17_0322) | galU | 385910..386782 (-) | 873 | WP_011079387.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FORC17_RS01845 (FORC17_0323) | qstR | 386968..387615 (-) | 648 | WP_011079388.1 | response regulator transcription factor | Regulator |
| FORC17_RS01850 (FORC17_0324) | ssb | 387915..388454 (+) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| FORC17_RS01855 (FORC17_0325) | csrD | 388607..390604 (+) | 1998 | WP_065090053.1 | RNase E specificity factor CsrD | - |
| FORC17_RS01860 (FORC17_0326) | - | 390617..392077 (+) | 1461 | WP_065090054.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24673.63 Da Isoelectric Point: 9.8565
>NTDB_id=157425 FORC17_RS01845 WP_011079388.1 386968..387615(-) (qstR) [Vibrio vulnificus strain FORC_017]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=157425 FORC17_RS01845 WP_011079388.1 386968..387615(-) (qstR) [Vibrio vulnificus strain FORC_017]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAACCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAAATTAAAAACCTACCCCTGATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACCGCCATTACAGACATGGCCAAAGGACTAAATTCGGTGATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAGTCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAACCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAAATTAAAAACCTACCCCTGATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACCGCCATTACAGACATGGCCAAAGGACTAAATTCGGTGATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAGTCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
47.196 |
99.535 |
0.47 |