Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SanJ4206_RS03520 Genome accession   NZ_CP012719
Coordinates   719986..720990 (+) Length   334 a.a.
NCBI ID   WP_003027685.1    Uniprot ID   A0AAI9NJ44
Organism   Streptococcus anginosus strain J4206     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 714986..725990
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS03510 (SanJ4206_0660) - 715808..718273 (+) 2466 WP_022525099.1 LTA synthase family protein -
  SanJ4206_RS03515 (SanJ4206_0661c) - 718640..719722 (-) 1083 WP_003027688.1 M24 family metallopeptidase -
  SanJ4206_RS03520 (SanJ4206_0662) ccpA 719986..720990 (+) 1005 WP_003027685.1 catabolite control protein A Regulator
  SanJ4206_RS03525 (SanJ4206_0663) - 721170..722168 (+) 999 WP_022525098.1 glycosyltransferase family 4 protein -
  SanJ4206_RS03530 (SanJ4206_0664) - 722170..723483 (+) 1314 WP_022525097.1 glycosyltransferase family 4 protein -
  SanJ4206_RS03535 (SanJ4206_0665) - 723510..723851 (+) 342 WP_003027678.1 hypothetical protein -
  SanJ4206_RS03540 (SanJ4206_0666) micA 724136..724837 (+) 702 WP_003027677.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37054.10 Da        Isoelectric Point: 5.5382

>NTDB_id=156776 SanJ4206_RS03520 WP_003027685.1 719986..720990(+) (ccpA) [Streptococcus anginosus strain J4206]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKDVNIPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=156776 SanJ4206_RS03520 WP_003027685.1 719986..720990(+) (ccpA) [Streptococcus anginosus strain J4206]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTGATTGACCGCTTGGATTACCGCCCAAATG
CGGTAGCGCGTGGTCTTGCTAGCAAAAAGACGACGACTGTTGGAGTTGTCATTCCAAATATCACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTCAATACACTGTTCTCAAAACAAGTGGACGGTATTATCTTTATGGGCTATCATTTGACAGAAA
AAATTCGTTCTGAGTTTTCTCGTTCACGGACGCCAGTTGTGCTTGCAGGTACAGTTGATGTCGAGCATCAATTGCCAAGT
GTTAATATTGATTACAAACAAGCAACTATAGATGCAGTTGAACGTCTTACAAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGATACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATATAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGGCTGTTAAATGGTTTATCTGACAAGGATGTAAATATACC
AGAAGATTTTGAAATCATCACTAGCGATGATTCGCAGGTAGCACGCTTTACTCGTCCAAATTTGACAACTATTGGTCAGC
CTTTGTATGACCTTGGTGCGATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGCTGGAAGAACGCGAAGTA
GTATTAGCTCATGGTCTTATTGAGCGCCGTTCAACAAGAAAGTAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.419

100

0.904
  ccpA Streptococcus pneumoniae D39

88.323

100

0.883
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment