Detailed information
Bioinformatically predicted
Overview
| Name | micB | Type | Regulator |
| Locus tag | RN80_RS06065 | Genome accession | NZ_CP012646 |
| Coordinates | 1236674..1238023 (+) | Length | 449 a.a. |
| NCBI ID | WP_060628226.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain KCOM 1350 (= ChDC B183) | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1231674..1243023
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RN80_RS06040 (RN80_06055) | - | 1231825..1232643 (+) | 819 | WP_000799056.1 | NAD kinase | - |
| RN80_RS06045 (RN80_06060) | - | 1232640..1233536 (+) | 897 | WP_060628222.1 | RluA family pseudouridine synthase | - |
| RN80_RS06050 (RN80_06065) | pta | 1233580..1234554 (+) | 975 | WP_000451580.1 | phosphate acetyltransferase | - |
| RN80_RS06055 (RN80_06070) | mutY | 1234743..1235918 (+) | 1176 | WP_060628224.1 | A/G-specific adenine glycosylase | - |
| RN80_RS06060 (RN80_06075) | micA | 1235974..1236681 (+) | 708 | WP_049539286.1 | response regulator YycF | Regulator |
| RN80_RS06065 (RN80_06080) | micB | 1236674..1238023 (+) | 1350 | WP_060628226.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| RN80_RS06070 (RN80_06085) | vicX | 1238025..1238834 (+) | 810 | WP_060628228.1 | MBL fold metallo-hydrolase | Regulator |
| RN80_RS06075 (RN80_06090) | - | 1238868..1239215 (-) | 348 | WP_060628229.1 | PedC/BrcD family bacteriocin maturation disulfide isomerase | - |
| RN80_RS06080 (RN80_06095) | - | 1239326..1241044 (-) | 1719 | WP_060628231.1 | phospho-sugar mutase | - |
Sequence
Protein
Download Length: 449 a.a. Molecular weight: 51462.99 Da Isoelectric Point: 4.7530
>NTDB_id=156025 RN80_RS06065 WP_060628226.1 1236674..1238023(+) (micB) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
MIKLIKDTVLTSDFIFILILLGFILVVTLLLLENRRDNIRLKQINQKVKDLIAGDYSQVLDMQGSSEITNITNNLNDLSE
VIRLTQENLEQESKRLHSILSYMTDGVLATNRRGKITMINDMAKKQLGVQKEDVLNKSILELLKIEDEYELRDLITQIPE
LMIDSQDANGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDQIRVQDEEKKYELVRDYPITSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVTMKTTDDQMILSISDQGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLG
LSIAKEIIKQHNGFIWAKSIYGKGSTFTIVLPYDKDAVKEEVWEDEVED
MIKLIKDTVLTSDFIFILILLGFILVVTLLLLENRRDNIRLKQINQKVKDLIAGDYSQVLDMQGSSEITNITNNLNDLSE
VIRLTQENLEQESKRLHSILSYMTDGVLATNRRGKITMINDMAKKQLGVQKEDVLNKSILELLKIEDEYELRDLITQIPE
LMIDSQDANGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATSHLDVELINFTAFITFILNRFDQIRVQDEEKKYELVRDYPITSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVTMKTTDDQMILSISDQGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLG
LSIAKEIIKQHNGFIWAKSIYGKGSTFTIVLPYDKDAVKEEVWEDEVED
Nucleotide
Download Length: 1350 bp
>NTDB_id=156025 RN80_RS06065 WP_060628226.1 1236674..1238023(+) (micB) [Streptococcus mitis strain KCOM 1350 (= ChDC B183)]
ATGATTAAACTAATTAAAGACACAGTTTTAACCAGTGATTTTATCTTTATCCTCATTCTACTTGGCTTTATTTTAGTGGT
GACCTTGCTCTTACTAGAAAATCGTCGGGATAATATTCGGTTGAAGCAAATTAATCAAAAAGTTAAAGACCTGATTGCAG
GAGATTATTCTCAGGTGTTGGACATGCAGGGAAGCTCTGAAATCACTAATATTACCAATAATCTCAATGATTTATCAGAA
GTAATTCGGTTGACCCAAGAAAATCTGGAACAAGAGAGTAAAAGATTACATAGTATCCTGTCTTACATGACGGACGGAGT
CCTTGCGACCAATCGTCGTGGCAAGATTACTATGATTAATGACATGGCCAAGAAACAGCTAGGTGTTCAGAAAGAAGATG
TTCTTAATAAGAGCATTCTAGAGTTGCTTAAGATTGAAGATGAATACGAACTTCGTGATTTGATTACCCAGATTCCTGAG
CTTATGATTGATTCTCAGGATGCTAATGGTGAATATCTGAGCCTTCGTGTACGCTTTGCCTTGGTCCGTCGAGAATCTGG
CTTTATCTCAGGTCTGGTTGCCGTTTTACACGATACGACGGAGCAGGAGAAGGAGGAACGCGAGCGGAGACTCTTTGTAT
CCAACGTTAGTCATGAGTTACGGACGCCTCTGACTAGTGTAAAATCCTATCTGGAAGCCTTGGATGAGGGTGCCTTGTCA
GAACCTGTCGCACCAGACTTTATCAAGGTGTCTCTAGACGAAACCAACCGTATGATGCGGATGGTGACAGATCTCCTCCA
TCTTTCACGGATTGATAATGCAACTAGTCACCTAGATGTGGAACTGATTAACTTTACAGCCTTTATTACTTTTATCCTCA
ACCGTTTTGATCAGATAAGAGTGCAGGATGAAGAGAAGAAATACGAACTGGTGAGAGATTACCCAATTACCTCTGTCTGG
ATTGAAATTGATACAGATAAGATGACACAGGTCATTGATAATATTCTTAACAATGCCATCAAGTATTCGCCAGATGGTGG
GAAAATCACAGTGACCATGAAAACAACTGACGATCAGATGATTTTATCTATCTCAGACCAAGGATTGGGTATTCCTAAGC
AGGATTTGCCACGTATCTTTGACCGTTTCTACCGTGTGGATCGTGCTAGAAGTCGTGCCCAAGGTGGAACAGGTTTGGGA
CTGTCTATTGCCAAAGAAATTATCAAACAACATAATGGTTTTATTTGGGCCAAGAGTATATATGGTAAGGGATCAACCTT
TACCATTGTGCTCCCTTATGATAAGGATGCAGTGAAGGAAGAAGTATGGGAGGACGAAGTAGAAGACTAG
ATGATTAAACTAATTAAAGACACAGTTTTAACCAGTGATTTTATCTTTATCCTCATTCTACTTGGCTTTATTTTAGTGGT
GACCTTGCTCTTACTAGAAAATCGTCGGGATAATATTCGGTTGAAGCAAATTAATCAAAAAGTTAAAGACCTGATTGCAG
GAGATTATTCTCAGGTGTTGGACATGCAGGGAAGCTCTGAAATCACTAATATTACCAATAATCTCAATGATTTATCAGAA
GTAATTCGGTTGACCCAAGAAAATCTGGAACAAGAGAGTAAAAGATTACATAGTATCCTGTCTTACATGACGGACGGAGT
CCTTGCGACCAATCGTCGTGGCAAGATTACTATGATTAATGACATGGCCAAGAAACAGCTAGGTGTTCAGAAAGAAGATG
TTCTTAATAAGAGCATTCTAGAGTTGCTTAAGATTGAAGATGAATACGAACTTCGTGATTTGATTACCCAGATTCCTGAG
CTTATGATTGATTCTCAGGATGCTAATGGTGAATATCTGAGCCTTCGTGTACGCTTTGCCTTGGTCCGTCGAGAATCTGG
CTTTATCTCAGGTCTGGTTGCCGTTTTACACGATACGACGGAGCAGGAGAAGGAGGAACGCGAGCGGAGACTCTTTGTAT
CCAACGTTAGTCATGAGTTACGGACGCCTCTGACTAGTGTAAAATCCTATCTGGAAGCCTTGGATGAGGGTGCCTTGTCA
GAACCTGTCGCACCAGACTTTATCAAGGTGTCTCTAGACGAAACCAACCGTATGATGCGGATGGTGACAGATCTCCTCCA
TCTTTCACGGATTGATAATGCAACTAGTCACCTAGATGTGGAACTGATTAACTTTACAGCCTTTATTACTTTTATCCTCA
ACCGTTTTGATCAGATAAGAGTGCAGGATGAAGAGAAGAAATACGAACTGGTGAGAGATTACCCAATTACCTCTGTCTGG
ATTGAAATTGATACAGATAAGATGACACAGGTCATTGATAATATTCTTAACAATGCCATCAAGTATTCGCCAGATGGTGG
GAAAATCACAGTGACCATGAAAACAACTGACGATCAGATGATTTTATCTATCTCAGACCAAGGATTGGGTATTCCTAAGC
AGGATTTGCCACGTATCTTTGACCGTTTCTACCGTGTGGATCGTGCTAGAAGTCGTGCCCAAGGTGGAACAGGTTTGGGA
CTGTCTATTGCCAAAGAAATTATCAAACAACATAATGGTTTTATTTGGGCCAAGAGTATATATGGTAAGGGATCAACCTT
TACCATTGTGCTCCCTTATGATAAGGATGCAGTGAAGGAAGAAGTATGGGAGGACGAAGTAGAAGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| micB | Streptococcus pneumoniae Cp1015 |
89.977 |
97.773 |
0.88 |
| vicK | Streptococcus mutans UA159 |
72.388 |
89.532 |
0.648 |