Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | AN401_RS16935 | Genome accession | NZ_CP012621 |
| Coordinates | 3584177..3585274 (-) | Length | 365 a.a. |
| NCBI ID | WP_094038386.1 | Uniprot ID | A0A231N2A9 |
| Organism | Zobellella denitrificans strain F13-1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3579177..3590274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AN401_RS16900 (AN401_16660) | - | 3579480..3579740 (-) | 261 | WP_094038380.1 | DUF1488 domain-containing protein | - |
| AN401_RS16905 (AN401_16665) | aroE | 3579737..3580561 (-) | 825 | WP_094038381.1 | shikimate dehydrogenase | - |
| AN401_RS16910 (AN401_16670) | hdfR | 3580728..3581585 (+) | 858 | WP_094038441.1 | HTH-type transcriptional regulator HdfR | - |
| AN401_RS16915 (AN401_16675) | hemF | 3581582..3582490 (-) | 909 | WP_096779980.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| AN401_RS16920 (AN401_16680) | - | 3582515..3583078 (-) | 564 | WP_096779981.1 | Sua5/YciO/YrdC/YwlC family protein | - |
| AN401_RS16925 (AN401_16685) | - | 3583105..3583653 (-) | 549 | WP_094038384.1 | type I DNA topoisomerase | - |
| AN401_RS16930 (AN401_16690) | - | 3583701..3584174 (-) | 474 | WP_094038385.1 | DUF494 family protein | - |
| AN401_RS16935 (AN401_16695) | dprA | 3584177..3585274 (-) | 1098 | WP_094038386.1 | DNA-processing protein DprA | Machinery gene |
| AN401_RS16940 (AN401_16700) | - | 3585255..3586322 (-) | 1068 | WP_198401758.1 | LysM peptidoglycan-binding domain-containing protein | - |
| AN401_RS16945 (AN401_16705) | def | 3586447..3586956 (+) | 510 | WP_094038442.1 | peptide deformylase | - |
| AN401_RS16950 (AN401_16710) | fmt | 3586976..3587920 (+) | 945 | WP_096779983.1 | methionyl-tRNA formyltransferase | - |
| AN401_RS16955 (AN401_16715) | rsmB | 3587946..3589241 (+) | 1296 | WP_096779984.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 39708.77 Da Isoelectric Point: 6.9967
>NTDB_id=155797 AN401_RS16935 WP_094038386.1 3584177..3585274(-) (dprA) [Zobellella denitrificans strain F13-1]
MPACDLERHPLLPWLALRHTTGIGPVGAVRLYQKLGAAWFNSPALAGCDLSEGQRRQLLSPQWPVLERLLAWQEAGRQRH
ILAWDHPDYPAQLKSATGAPILLFVDGELAALRREQLAVVGSRHPSYVGRENTRTLVPLLVEAGLAITSGLAIGIDGLSH
QAALDKGGITLAVLGSGLEQCYPRRHRRLATDIMARGGALLSECYPWEGPLAHHFPRRNRIISGLSLGVLVMEAAERSGS
LITARFALEQGREVFAIPGAWQNPQAGGCNRLIQQGAKLVCDVRDILEELAAFSEAAIKIHPPVTEELLPYPDLLDNVGL
EATAVDLIASRCQQPVQEVLTRLVELELAGWVESVPGGYVRARRG
MPACDLERHPLLPWLALRHTTGIGPVGAVRLYQKLGAAWFNSPALAGCDLSEGQRRQLLSPQWPVLERLLAWQEAGRQRH
ILAWDHPDYPAQLKSATGAPILLFVDGELAALRREQLAVVGSRHPSYVGRENTRTLVPLLVEAGLAITSGLAIGIDGLSH
QAALDKGGITLAVLGSGLEQCYPRRHRRLATDIMARGGALLSECYPWEGPLAHHFPRRNRIISGLSLGVLVMEAAERSGS
LITARFALEQGREVFAIPGAWQNPQAGGCNRLIQQGAKLVCDVRDILEELAAFSEAAIKIHPPVTEELLPYPDLLDNVGL
EATAVDLIASRCQQPVQEVLTRLVELELAGWVESVPGGYVRARRG
Nucleotide
Download Length: 1098 bp
>NTDB_id=155797 AN401_RS16935 WP_094038386.1 3584177..3585274(-) (dprA) [Zobellella denitrificans strain F13-1]
ATGCCGGCCTGCGACCTTGAACGGCACCCGCTGCTGCCCTGGCTGGCGCTGCGCCACACCACCGGCATAGGCCCGGTCGG
CGCCGTCAGGCTCTACCAGAAGCTGGGAGCCGCCTGGTTCAATTCGCCGGCGCTCGCCGGCTGTGACCTGAGCGAAGGGC
AACGGCGGCAACTGCTCAGTCCCCAATGGCCGGTGTTGGAGCGGCTGCTGGCCTGGCAGGAGGCTGGCCGCCAACGCCAT
ATCCTGGCATGGGACCACCCCGACTACCCCGCGCAGCTCAAGTCGGCGACCGGTGCGCCTATCCTGCTGTTCGTTGACGG
CGAACTGGCGGCGTTGCGACGGGAGCAACTGGCGGTGGTGGGCAGCCGCCACCCCTCCTATGTCGGCCGGGAAAACACCA
GGACCCTGGTGCCCCTGCTGGTGGAGGCCGGTCTGGCCATCACCTCGGGGCTGGCCATCGGCATCGACGGTCTGAGCCAC
CAGGCGGCGCTGGACAAGGGGGGCATCACCCTGGCGGTACTGGGGTCGGGGCTGGAGCAATGCTATCCCAGGCGCCATCG
CCGCCTGGCCACGGACATCATGGCGCGGGGCGGTGCCCTGCTGTCCGAGTGCTATCCCTGGGAAGGGCCGCTGGCCCATC
ACTTCCCCCGCCGCAATCGCATCATCAGCGGGCTGAGCCTGGGGGTGCTGGTGATGGAGGCGGCGGAGCGCAGCGGCTCG
CTGATCACCGCCCGCTTTGCACTGGAGCAGGGGCGGGAAGTGTTCGCCATTCCCGGCGCCTGGCAGAATCCCCAGGCCGG
GGGCTGCAACCGGCTGATCCAGCAGGGAGCCAAGCTGGTCTGTGATGTCCGGGATATCCTCGAGGAACTGGCGGCCTTTT
CCGAGGCGGCGATAAAAATTCATCCGCCGGTCACGGAGGAATTATTGCCTTATCCGGACTTGTTGGATAACGTAGGTTTA
GAGGCAACGGCAGTGGACTTGATCGCGTCCCGTTGTCAACAGCCGGTGCAGGAGGTACTTACCCGGTTGGTCGAGCTGGA
ATTGGCTGGCTGGGTGGAATCCGTACCCGGGGGTTATGTCAGAGCGAGGAGGGGCTGA
ATGCCGGCCTGCGACCTTGAACGGCACCCGCTGCTGCCCTGGCTGGCGCTGCGCCACACCACCGGCATAGGCCCGGTCGG
CGCCGTCAGGCTCTACCAGAAGCTGGGAGCCGCCTGGTTCAATTCGCCGGCGCTCGCCGGCTGTGACCTGAGCGAAGGGC
AACGGCGGCAACTGCTCAGTCCCCAATGGCCGGTGTTGGAGCGGCTGCTGGCCTGGCAGGAGGCTGGCCGCCAACGCCAT
ATCCTGGCATGGGACCACCCCGACTACCCCGCGCAGCTCAAGTCGGCGACCGGTGCGCCTATCCTGCTGTTCGTTGACGG
CGAACTGGCGGCGTTGCGACGGGAGCAACTGGCGGTGGTGGGCAGCCGCCACCCCTCCTATGTCGGCCGGGAAAACACCA
GGACCCTGGTGCCCCTGCTGGTGGAGGCCGGTCTGGCCATCACCTCGGGGCTGGCCATCGGCATCGACGGTCTGAGCCAC
CAGGCGGCGCTGGACAAGGGGGGCATCACCCTGGCGGTACTGGGGTCGGGGCTGGAGCAATGCTATCCCAGGCGCCATCG
CCGCCTGGCCACGGACATCATGGCGCGGGGCGGTGCCCTGCTGTCCGAGTGCTATCCCTGGGAAGGGCCGCTGGCCCATC
ACTTCCCCCGCCGCAATCGCATCATCAGCGGGCTGAGCCTGGGGGTGCTGGTGATGGAGGCGGCGGAGCGCAGCGGCTCG
CTGATCACCGCCCGCTTTGCACTGGAGCAGGGGCGGGAAGTGTTCGCCATTCCCGGCGCCTGGCAGAATCCCCAGGCCGG
GGGCTGCAACCGGCTGATCCAGCAGGGAGCCAAGCTGGTCTGTGATGTCCGGGATATCCTCGAGGAACTGGCGGCCTTTT
CCGAGGCGGCGATAAAAATTCATCCGCCGGTCACGGAGGAATTATTGCCTTATCCGGACTTGTTGGATAACGTAGGTTTA
GAGGCAACGGCAGTGGACTTGATCGCGTCCCGTTGTCAACAGCCGGTGCAGGAGGTACTTACCCGGTTGGTCGAGCTGGA
ATTGGCTGGCTGGGTGGAATCCGTACCCGGGGGTTATGTCAGAGCGAGGAGGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Vibrio campbellii strain DS40M4 |
48.257 |
100 |
0.493 |
| dprA | Vibrio cholerae strain A1552 |
45.989 |
100 |
0.471 |
| dprA | Legionella pneumophila strain ERS1305867 |
44.044 |
98.904 |
0.436 |
| dprA | Glaesserella parasuis strain SC1401 |
44.412 |
93.151 |
0.414 |
| dprA | Haemophilus influenzae Rd KW20 |
45.361 |
79.726 |
0.362 |