Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   AK825_RS12030 Genome accession   NZ_CP012533
Coordinates   2943094..2943474 (-) Length   126 a.a.
NCBI ID   WP_058369474.1    Uniprot ID   A0A1Q8DVX3
Organism   Psychrobacter sp. P11G5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2938094..2948474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AK825_RS12010 (AK825_12000) - 2938481..2939539 (-) 1059 WP_227514069.1 CheR family methyltransferase -
  AK825_RS14920 - 2939660..2941768 (-) 2109 WP_227514070.1 methyl-accepting chemotaxis protein -
  AK825_RS12020 (AK825_12010) - 2942018..2942545 (-) 528 WP_068037751.1 chemotaxis protein CheW -
  AK825_RS12025 (AK825_12015) - 2942549..2942911 (-) 363 WP_068037754.1 response regulator -
  AK825_RS12030 (AK825_12020) pilG 2943094..2943474 (-) 381 WP_058369474.1 twitching motility response regulator PilG Regulator
  AK825_RS12035 (AK825_12025) - 2944000..2945253 (+) 1254 WP_227514071.1 HlyD family efflux transporter periplasmic adaptor subunit -
  AK825_RS12040 (AK825_12030) - 2945660..2946382 (+) 723 WP_068037760.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 126 a.a.        Molecular weight: 14131.16 Da        Isoelectric Point: 4.4662

>NTDB_id=155017 AK825_RS12030 WP_058369474.1 2943094..2943474(-) (pilG) [Psychrobacter sp. P11G5]
MENNFEGLKVMVIDDSKTIRRTAETLLQKAGCEVVTAIDGFDALAKIVDNNPDIIFVDIMMPRLDGYQTCALIKNNPDYA
STPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKDELFETINQYRS

Nucleotide


Download         Length: 381 bp        

>NTDB_id=155017 AK825_RS12030 WP_058369474.1 2943094..2943474(-) (pilG) [Psychrobacter sp. P11G5]
ATGGAAAATAATTTTGAAGGGTTAAAGGTCATGGTTATTGATGACTCAAAAACCATTCGTCGTACCGCTGAGACTTTATT
GCAAAAAGCTGGCTGTGAAGTCGTTACTGCAATTGATGGCTTTGATGCACTCGCAAAGATTGTGGATAATAATCCTGACA
TAATTTTTGTCGATATTATGATGCCACGCCTTGATGGTTATCAGACCTGCGCATTGATCAAAAATAACCCTGATTATGCA
AGTACACCGGTGATCATGTTGTCCTCAAAAGATGGACTGTTTGATAAAGCACGAGGCCGTATTGTTGGTTCTGATGAGTA
TCTTACTAAGCCTTTTAGTAAAGATGAGCTATTTGAGACGATTAATCAATATCGCTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Q8DVX3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76.19

100

0.762
  pilH Synechocystis sp. PCC 6803

41.228

90.476

0.373
  vicR Streptococcus mutans UA159

40.517

92.063

0.373
  micA Streptococcus pneumoniae Cp1015

42.202

86.508

0.365

Multiple sequence alignment