Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AMD29_RS10765 Genome accession   NZ_CP012419
Coordinates   2096500..2097273 (+) Length   257 a.a.
NCBI ID   WP_000456088.1    Uniprot ID   A0AAV3JLJ5
Organism   Streptococcus agalactiae strain SG-M1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2091500..2102273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AMD29_RS10755 (AMD29_10750) rlmH 2094493..2094972 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  AMD29_RS10760 (AMD29_10755) htrA 2095173..2096402 (+) 1230 WP_000728356.1 S1C family serine protease Regulator
  AMD29_RS10765 (AMD29_10760) spo0J 2096500..2097273 (+) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator
  AMD29_RS10770 (AMD29_10765) dnaA 2097482..2098843 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  AMD29_RS10775 (AMD29_10770) dnaN 2098998..2100134 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  AMD29_RS10780 (AMD29_10775) - 2100192..2101085 (+) 894 WP_000987448.1 diacylglycerol/lipid kinase family protein -
  AMD29_RS10785 (AMD29_10780) - 2101095..2101292 (+) 198 WP_000285199.1 DUF951 domain-containing protein -
  AMD29_RS11320 - 2101458..2101610 (+) 153 WP_079255570.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29237.78 Da        Isoelectric Point: 10.0836

>NTDB_id=154418 AMD29_RS10765 WP_000456088.1 2096500..2097273(+) (spo0J) [Streptococcus agalactiae strain SG-M1]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQKELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=154418 AMD29_RS10765 WP_000456088.1 2096500..2097273(+) (spo0J) [Streptococcus agalactiae strain SG-M1]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGGCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAAAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568

Multiple sequence alignment