Detailed information
Bioinformatically predicted
Overview
| Name | ruvB | Type | Machinery gene |
| Locus tag | A6M16_RS00330 | Genome accession | NZ_CP015557 |
| Coordinates | 54526..55527 (+) | Length | 333 a.a. |
| NCBI ID | WP_004195448.1 | Uniprot ID | A0A0H3MST2 |
| Organism | Streptococcus suis strain DN13 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 49526..60527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6M16_RS00305 (A6M16_00305) | - | 49631..50209 (+) | 579 | WP_024395318.1 | CPBP family intramembrane glutamic endopeptidase | - |
| A6M16_RS00310 (A6M16_00310) | - | 50224..50652 (+) | 429 | WP_024395317.1 | Msa family membrane protein | - |
| A6M16_RS00315 (A6M16_00315) | - | 50645..51517 (+) | 873 | WP_024395316.1 | ABC transporter ATP-binding protein | - |
| A6M16_RS00320 (A6M16_00320) | - | 51523..52293 (+) | 771 | WP_063725141.1 | hypothetical protein | - |
| A6M16_RS00325 (A6M16_00325) | - | 52296..54008 (+) | 1713 | WP_063725142.1 | ABC transporter ATP-binding protein | - |
| A6M16_RS11030 | - | 54109..54282 (+) | 174 | WP_014637276.1 | hypothetical protein | - |
| A6M16_RS00330 (A6M16_00330) | ruvB | 54526..55527 (+) | 1002 | WP_004195448.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| A6M16_RS00335 (A6M16_00335) | - | 55527..56273 (+) | 747 | WP_024395313.1 | GNAT family N-acetyltransferase | - |
| A6M16_RS00340 (A6M16_00340) | - | 56275..56898 (+) | 624 | WP_024395312.1 | HAD-IA family hydrolase | - |
| A6M16_RS00345 (A6M16_00345) | comR | 57003..57902 (+) | 900 | WP_015646238.1 | helix-turn-helix domain-containing protein | Regulator |
| A6M16_RS00350 (A6M16_00350) | - | 58109..59329 (+) | 1221 | WP_024395311.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37613.12 Da Isoelectric Point: 4.4673
>NTDB_id=154116 A6M16_RS00330 WP_004195448.1 54526..55527(+) (ruvB) [Streptococcus suis strain DN13]
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK
MTNRILDMEQMQDEEYVERTLRPQKLNEYIGQDKVKDQLKIFIEAAKLRDEALDHTLLFGPPGLGKTTMAFVIANELGVN
IKQTSGPVIEKAGDLVALLNDLEPGDVLFIDEIHRMPMAVEEILYSAMEDFYIDIMIGAGEASRSVHLELPPFTLIGATT
RAGMLSNPLRARFGITGHMEYYELADLTEIVERTADIFDMEITHEAAIELARRSRGTPRIANRLLKRVRDFAQIMGDGLI
DDSITDKALTMLDVDREGLDYVDQKILRTMIEMYGGGPVGLNTLSVNIAEERETVEDMYEPYLIQQGFLMRTRTGRVATA
KAYEHLGYPYTEK
Nucleotide
Download Length: 1002 bp
>NTDB_id=154116 A6M16_RS00330 WP_004195448.1 54526..55527(+) (ruvB) [Streptococcus suis strain DN13]
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCTGTCGGTCTTAACACCCTGTCGGTCAATATCGCTGAAGAGCGTGAAA
CAGTGGAAGACATGTACGAACCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACGCGGACAGGTCGGGTCGCGACAGCT
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA
ATGACAAATCGAATTTTAGACATGGAACAAATGCAGGACGAGGAGTATGTTGAGCGTACCCTGCGTCCACAGAAATTAAA
TGAGTACATCGGTCAGGACAAGGTTAAGGACCAGCTCAAAATCTTTATCGAGGCAGCCAAGCTCCGTGATGAAGCCTTGG
ACCATACCCTTCTGTTTGGCCCTCCAGGTTTGGGAAAGACCACCATGGCCTTTGTTATCGCCAACGAACTGGGTGTCAAT
ATCAAGCAGACTAGTGGTCCTGTTATTGAGAAAGCAGGTGACTTGGTGGCCCTTCTCAACGACTTGGAGCCTGGCGACGT
CCTCTTTATCGATGAAATCCACCGTATGCCTATGGCGGTAGAGGAGATTCTTTACTCAGCCATGGAAGACTTCTACATCG
ACATTATGATTGGAGCAGGGGAGGCTAGTCGCTCCGTGCATTTGGAGTTGCCGCCTTTTACCCTGATTGGAGCGACCACT
CGTGCGGGTATGCTGTCCAATCCTCTGCGGGCCCGTTTTGGGATTACCGGTCACATGGAATACTACGAATTGGCTGATTT
GACGGAGATTGTCGAGCGGACGGCGGATATCTTTGATATGGAGATTACTCATGAAGCTGCTATTGAGCTGGCTCGTCGGT
CTCGTGGAACTCCCCGTATCGCTAACCGTCTGCTCAAGCGGGTGCGGGATTTCGCACAGATTATGGGCGACGGCCTGATT
GATGACAGCATTACGGACAAGGCTTTGACCATGCTGGACGTGGACCGTGAAGGTCTGGACTACGTGGACCAGAAGATTCT
CCGCACCATGATTGAGATGTACGGTGGCGGTCCTGTCGGTCTTAACACCCTGTCGGTCAATATCGCTGAAGAGCGTGAAA
CAGTGGAAGACATGTACGAACCTTACCTGATTCAGCAGGGCTTCCTCATGCGGACGCGGACAGGTCGGGTCGCGACAGCT
AAGGCTTACGAGCACTTGGGTTATCCCTATACGGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvB | Streptococcus pneumoniae TIGR4 |
90.332 |
99.399 |
0.898 |
| ruvB | Streptococcus pneumoniae R6 |
90.03 |
99.399 |
0.895 |
| ruvB | Streptococcus pneumoniae D39 |
90.03 |
99.399 |
0.895 |
| ruvB | Bacillus subtilis subsp. subtilis str. 168 |
58.589 |
97.898 |
0.574 |
| ruvB | Helicobacter pylori 26695 |
51.064 |
98.799 |
0.505 |
| ruvB | Synechocystis sp. PCC 6803 |
50.479 |
93.994 |
0.474 |