Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DE10444_RS04045 Genome accession   NZ_CP012392
Coordinates   788845..789306 (-) Length   153 a.a.
NCBI ID   WP_002230694.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DE10444     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 783845..794306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DE10444_RS04015 (DE10444_0731) - 783946..785502 (+) 1557 WP_002220608.1 TerC family protein -
  DE10444_RS04020 (DE10444_0732) surE 785519..786265 (+) 747 WP_002230699.1 5'/3'-nucleotidase SurE -
  DE10444_RS04025 (DE10444_0733) - 786521..787768 (+) 1248 WP_002229665.1 M23 family metallopeptidase -
  DE10444_RS04030 (DE10444_0734) - 787975..788457 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  DE10444_RS13220 (DE10444_0735) - 788610..788771 (-) 162 WP_002235025.1 hypothetical protein -
  DE10444_RS04045 (DE10444_0736) recX 788845..789306 (-) 462 WP_002230694.1 recombination regulator RecX Regulator
  DE10444_RS04050 (DE10444_0737) - 789363..790070 (-) 708 WP_002229666.1 phosphoglycolate phosphatase -
  DE10444_RS04060 (DE10444_0738) - 790477..791742 (+) 1266 WP_002230693.1 Glu/Leu/Phe/Val family dehydrogenase -
  DE10444_RS04065 (DE10444_0739) - 791800..792606 (-) 807 WP_002212946.1 DUF4198 domain-containing protein -
  DE10444_RS04070 (DE10444_0740) - 792951..793160 (+) 210 WP_002212949.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17788.07 Da        Isoelectric Point: 9.9314

>NTDB_id=154116 DE10444_RS04045 WP_002230694.1 788845..789306(-) (recX) [Neisseria meningitidis strain DE10444]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSNEKQAAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=154116 DE10444_RS04045 WP_002230694.1 788845..789306(-) (recX) [Neisseria meningitidis strain DE10444]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAACGAAAAACAGGCCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967

Multiple sequence alignment