Detailed information NTG0154100

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: A6K30_RS05495
• Genome accession: NZ_CP015528
• Coordinates: 1087587..1089560 (+)
• Length: 657 a.a.
• NCBI ID: WP_053875446.1
• Uniprot ID: -
• Organism: Campylobacter coli strain YH501
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1082587..1094560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6K30_RS05465 (A6K30_05465)	flgH	1082775..1083473 (+)	699	WP_002787400.1	flagellar basal body L-ring protein FlgH	-
A6K30_RS05470 (A6K30_05470)	ispG	1083557..1084630 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
A6K30_RS05475 (A6K30_05475)	-	1084690..1086528 (-)	1839	WP_002787399.1	primosomal protein N'	-
A6K30_RS05480 (A6K30_05480)	Cj0683	1086525..1086971 (-)	447	WP_032685882.1	type II secretion system protein	Machinery gene
A6K30_RS05485 (A6K30_05485)	-	1086968..1087213 (-)	246	WP_002776428.1	hypothetical protein	-
A6K30_RS05490 (A6K30_05490)	-	1087203..1087433 (-)	231	WP_002776426.1	hypothetical protein	-
A6K30_RS05495 (A6K30_05495)	uvrB	1087587..1089560 (+)	1974	WP_053875446.1	excinuclease ABC subunit UvrB	Machinery gene
A6K30_RS05500 (A6K30_05500)	-	1089595..1091019 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
A6K30_RS05505 (A6K30_05505)	-	1091206..1092456 (-)	1251	WP_002781614.1	RNA polymerase factor sigma-54	-
A6K30_RS05510 (A6K30_05510)	lptB	1092456..1093184 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
A6K30_RS05515 (A6K30_05515)	tsaE	1093177..1093584 (-)	408	WP_063652034.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
A6K30_RS05520 (A6K30_05520)	-	1093581..1093826 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 76073.50 Da
• Isoelectric Point: 6.4586

>NTDB_id=154100 A6K30_RS05495 WP_053875446.1 1087587..1089560(+) (uvrB) [Campylobacter coli strain YH501]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKVKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKIVKELRKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=154100 A6K30_RS05495 WP_053875446.1 1087587..1089560(+) (uvrB) [Campylobacter coli strain YH501]
ATGTTAGAACTTACAAGCGATTTTAAGCCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGACATTTATCCAGCTTATTATGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGTGATGAACTGGATGCAATGTATCATTATAATGTTTTAGAAAATAAAAAAGTCAAAGATTTAAAACGCTTCATACTC
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTTTCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGCAGAAAACAAACCTTGGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTGTTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAATTTG
AAAAAATGCCTGCTAATGAAAGAGCTAAAATCGTAAAAGAGCTTCGTAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

• UvrB interaction domain (UvrB_inter) (158-246)

• UvrB/uvrC motif (UVR) (623-656)

• Ultra-violet resistance protein B (UvrB) (552-593)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.305	99.848	0.502
uvrB	Streptococcus pneumoniae TIGR4	50.305	99.848	0.502
uvrB	Streptococcus pneumoniae D39	50.305	99.848	0.502