Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   NX99_RS03160 Genome accession   NZ_CP015282
Coordinates   793018..793674 (+) Length   218 a.a.
NCBI ID   WP_073687598.1    Uniprot ID   -
Organism   Streptococcus salivarius strain ATCC 27945     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 788018..798674
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NX99_RS03130 (NX99_03090) - 788308..788577 (-) 270 WP_002884134.1 DUF3165 family protein -
  NX99_RS03135 (NX99_03095) typA 788597..790447 (-) 1851 WP_084914706.1 translational GTPase TypA -
  NX99_RS03140 (NX99_03100) - 790592..791560 (-) 969 WP_002884020.1 ROK family glucokinase -
  NX99_RS03145 (NX99_03105) - 791553..791759 (-) 207 WP_014634249.1 YqgQ family protein -
  NX99_RS03150 (NX99_03110) - 791862..792299 (-) 438 WP_084914708.1 Fur family transcriptional regulator -
  NX99_RS03155 (NX99_03115) - 792387..792908 (-) 522 WP_014634248.1 Dps family protein -
  NX99_RS03160 cclA/cilC 793018..793674 (+) 657 WP_073687598.1 prepilin peptidase Machinery gene
  NX99_RS03165 (NX99_03120) - 793706..795103 (-) 1398 WP_073687599.1 serine hydrolase -
  NX99_RS03170 (NX99_03125) sodA 795201..795806 (-) 606 WP_004182735.1 superoxide dismutase SodA -
  NX99_RS03175 (NX99_03130) holA 795902..796936 (-) 1035 WP_084914709.1 DNA polymerase III subunit delta -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25089.45 Da        Isoelectric Point: 7.6981

>NTDB_id=153003 NX99_RS03160 WP_073687598.1 793018..793674(+) (cclA/cilC) [Streptococcus salivarius strain ATCC 27945]
MLSIIYFFLGASLGSFIGLICDRFPEKSIIFPSSHCSHCKHQLCFFEIIPILSQLFLRSRCRSCQTPIPLRYLFMELFCG
VICLLYFYDFLSLEVTYFLYFSLCLSIFDLKHKSYPLLIWIVGTVPLLFMGNYYLSFALGIILAILSYMKHLNIGEGDFL
YLASASLIFPFSKILLIIEIACLLGLAYFLLQRNLKECIAFVPFLFLGILLLTFCSII

Nucleotide


Download         Length: 657 bp        

>NTDB_id=153003 NX99_RS03160 WP_073687598.1 793018..793674(+) (cclA/cilC) [Streptococcus salivarius strain ATCC 27945]
ATGTTAAGTATTATTTATTTTTTTCTAGGAGCCTCTTTAGGTTCATTTATCGGACTAATTTGTGATCGTTTTCCTGAAAA
GTCGATTATTTTTCCTAGTAGTCACTGTAGTCACTGCAAGCATCAGTTGTGTTTTTTCGAGATAATCCCTATCCTCTCAC
AACTTTTCTTAAGATCTCGATGTCGTTCATGTCAGACTCCTATCCCTCTTCGTTACCTCTTTATGGAACTATTTTGTGGA
GTAATATGCCTTCTATATTTTTATGACTTTTTAAGTCTTGAAGTAACCTACTTTCTTTACTTCAGCCTTTGTCTATCAAT
TTTTGATTTGAAACATAAATCCTATCCGCTTCTGATTTGGATAGTTGGAACAGTCCCACTCTTATTCATGGGCAACTACT
ACCTCTCATTTGCCTTGGGGATAATCCTCGCCATCCTTTCTTATATGAAACATCTAAATATTGGGGAAGGAGATTTTCTC
TACTTAGCAAGTGCCTCACTAATTTTCCCATTTTCAAAAATACTACTTATTATCGAAATTGCCTGCCTATTAGGACTAGC
TTACTTCCTTCTACAAAGAAATCTCAAGGAATGCATCGCATTTGTCCCATTTCTTTTTCTAGGGATATTACTTCTTACTT
TTTGTTCAATTATATAG

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-90)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

40.367

100

0.404
  cclA/cilC Streptococcus pneumoniae TIGR4

40.367

100

0.404
  cclA/cilC Streptococcus mitis NCTC 12261

40.187

98.165

0.394
  cclA/cilC Streptococcus pneumoniae Rx1

40.187

98.165

0.394
  cclA/cilC Streptococcus pneumoniae D39

40.187

98.165

0.394
  cclA/cilC Streptococcus pneumoniae R6

40.187

98.165

0.394

Multiple sequence alignment