Detailed information NTG0151748

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: A4U84_RS03720
• Genome accession: NZ_CP015099
• Coordinates: 799560..800234 (+)
• Length: 224 a.a.
• NCBI ID: WP_005713163.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain SC1401
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 794560..805234

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4U84_RS03685 (A4U84_03685)	rpmG	795560..795730 (-)	171	WP_005624479.1	50S ribosomal protein L33	-
A4U84_RS03690 (A4U84_03690)	rpmB	795742..795978 (-)	237	WP_006251446.1	50S ribosomal protein L28	-
A4U84_RS03695 (A4U84_03695)	radC	796104..796820 (-)	717	WP_021113221.1	RadC family protein	Machinery gene
A4U84_RS03700 (A4U84_03700)	coaBC	796990..798195 (+)	1206	WP_062924027.1	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	-
A4U84_RS03705 (A4U84_03705)	dut	798192..798647 (+)	456	WP_021119359.1	dUTP diphosphatase	-
A4U84_RS03710 (A4U84_03710)	slmA	798656..799261 (+)	606	WP_021114417.1	nucleoid occlusion factor SlmA	-
A4U84_RS03715 (A4U84_03715)	-	799269..799493 (+)	225	WP_005713165.1	YheU family protein	-
A4U84_RS03720 (A4U84_03720)	crp	799560..800234 (+)	675	WP_005713163.1	cAMP-activated global transcriptional regulator CRP	Regulator
A4U84_RS03725 (A4U84_03725)	-	800489..800740 (+)	252	WP_223300025.1	hypothetical protein	-
A4U84_RS03730 (A4U84_03730)	-	800779..800925 (+)	147	WP_021110348.1	hypothetical protein	-
A4U84_RS03735 (A4U84_03735)	pyrD	801046..802053 (-)	1008	WP_021111227.1	quinone-dependent dihydroorotate dehydrogenase	-
A4U84_RS03745 (A4U84_03745)	-	802426..803376 (-)	951	WP_005713153.1	ribose-phosphate pyrophosphokinase	-
A4U84_RS03750 (A4U84_03750)	ispE	803404..804249 (-)	846	WP_021113204.1	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	-
A4U84_RS03755 (A4U84_03755)	lolB	804251..804883 (-)	633	WP_021110345.1	lipoprotein insertase outer membrane protein LolB	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25192.17 Da
• Isoelectric Point: 6.9079

>NTDB_id=151748 A4U84_RS03720 WP_005713163.1 799560..800234(+) (crp) [Glaesserella parasuis strain SC1401]
MQDVSISTAQLEDVSPLPSIHDPAVEWFLTHCHIHRYPAKYTLIHAGEDAESLFYIVSGAVSVFIKDEEGKEMLLTNLGQ
GEFVGEISLFEEKAQPRTAWVRTKGNCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRMTSRQVSNLAFLDVTGRIAQ
TLMNLAKMPDAMTHPQGMQIKITRQEIGQMVGCSRETVGRILKMLEDEGLISAHGKTIVVYGTR

Nucleotide

• Length: 675 bp

>NTDB_id=151748 A4U84_RS03720 WP_005713163.1 799560..800234(+) (crp) [Glaesserella parasuis strain SC1401]
ATGCAAGATGTTTCAATCTCAACCGCACAGCTTGAAGATGTCAGCCCATTACCATCCATTCACGATCCTGCGGTGGAATG
GTTTTTAACTCACTGTCATATTCATCGTTATCCAGCAAAATATACTTTAATTCACGCAGGTGAAGATGCTGAATCACTGT
TTTATATTGTCAGCGGAGCTGTGTCTGTCTTTATCAAGGATGAAGAAGGCAAGGAGATGTTATTAACCAATTTAGGCCAA
GGCGAATTTGTCGGTGAAATCAGCCTTTTTGAAGAAAAGGCTCAGCCTCGCACTGCTTGGGTAAGAACTAAAGGTAACTG
TGAAATTGCTGAAATTTCTTATAAAAAATTCAAGCAATTAGTGCATCTTAATCCAGATATTTTGATGTATTTATCCGCAC
AGATGGCTCGCCGTTTACGAATGACATCAAGACAGGTTAGTAACCTAGCATTTCTTGATGTAACAGGTCGTATTGCTCAA
ACATTGATGAATTTAGCTAAAATGCCTGATGCGATGACTCACCCTCAGGGTATGCAGATTAAAATTACTCGCCAAGAAAT
TGGTCAAATGGTTGGTTGCTCACGAGAAACTGTAGGCCGTATTTTGAAAATGCTTGAGGATGAAGGGTTAATTTCTGCAC
ATGGTAAAACTATCGTTGTGTATGGGACAAGATAA

Domains

Predicted by InterProScan.

• Cyclic nucleotide-binding domain (cNMP_binding) (35-121)

• Crp-like helix-turn-helix domain (HTH_Crp_2) (156-220)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Vibrio cholerae strain A1552	75.862	90.625	0.687
crp	Haemophilus influenzae Rd KW20	73.399	90.625	0.665
crp	Acinetobacter baumannii D1279779	48	89.286	0.429