Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACP86_RS08100 Genome accession   NZ_CP011929
Coordinates   1721219..1721611 (+) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter sp. CP1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1716219..1726611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACP86_RS08070 (ACP86_08065) - 1716517..1717530 (-) 1014 WP_008175649.1 aspartate carbamoyltransferase catalytic subunit -
  ACP86_RS08075 (ACP86_08070) pyrR 1717558..1718067 (-) 510 WP_008175647.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACP86_RS08080 (ACP86_08075) ruvX 1718075..1718497 (-) 423 WP_053113266.1 Holliday junction resolvase RuvX -
  ACP86_RS08085 (ACP86_08080) - 1718490..1719056 (-) 567 WP_053113267.1 YqgE/AlgH family protein -
  ACP86_RS08090 (ACP86_08085) - 1719053..1719919 (-) 867 WP_053113268.1 energy transducer TonB -
  ACP86_RS08095 (ACP86_08090) gshB 1719968..1720921 (-) 954 WP_014578672.1 glutathione synthase -
  ACP86_RS08100 (ACP86_08095) pilG 1721219..1721611 (+) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  ACP86_RS08105 (ACP86_08100) pilH 1721644..1722006 (+) 363 WP_011787171.1 twitching motility response regulator PilH -
  ACP86_RS08110 (ACP86_08105) - 1722027..1722572 (+) 546 WP_008172777.1 chemotaxis protein CheW -
  ACP86_RS08115 (ACP86_08110) - 1722664..1724739 (+) 2076 WP_053113269.1 methyl-accepting chemotaxis protein -
  ACP86_RS08120 (ACP86_08115) - 1724767..1725666 (+) 900 WP_053113270.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=149346 ACP86_RS08100 WP_008175635.1 1721219..1721611(+) (pilG) [Marinobacter sp. CP1]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=149346 ACP86_RS08100 WP_008175635.1 1721219..1721611(+) (pilG) [Marinobacter sp. CP1]
ATGGATGACAACTTCGAGAACTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCCAAGATTGCCGATTCACAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAGGACGGTCTGTTCGACAAGGCCAAGGGCCGTATCGTCGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGTAAGGATGAGCTGCTTAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment