Detailed information NTG0149033

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: AB691_RS20005
• Genome accession: NZ_CP011854
• Coordinates: 4344326..4345471 (-)
• Length: 381 a.a.
• NCBI ID: WP_019405534.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain SLG510A3-8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4339326..4350471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB691_RS19980 (AB691_4153)	-	4339403..4340419 (+)	1017	WP_048330150.1	aspartate carbamoyltransferase catalytic subunit	-
AB691_RS19985 (AB691_4154)	-	4340419..4341693 (+)	1275	WP_048330152.1	dihydroorotase	-
AB691_RS19990 (AB691_4155)	-	4341751..4342146 (-)	396	WP_048330154.1	NINE protein	-
AB691_RS19995 (AB691_4156)	-	4342282..4343496 (+)	1215	WP_014598001.1	putative DNA modification/repair radical SAM protein	-
AB691_RS20000 (AB691_4157)	-	4343496..4344329 (+)	834	WP_048330155.1	TIGR03915 family putative DNA repair protein	-
AB691_RS20005 (AB691_4158)	pilU	4344326..4345471 (-)	1146	WP_019405534.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
AB691_RS20010 (AB691_4159)	pilT	4345531..4346565 (-)	1035	WP_011914970.1	type IV pilus twitching motility protein PilT	Machinery gene
AB691_RS20015 (AB691_4161)	-	4346632..4347321 (+)	690	WP_043942282.1	YggS family pyridoxal phosphate-dependent enzyme	-
AB691_RS20020 (AB691_4162)	proC	4347332..4348156 (+)	825	WP_014598005.1	pyrroline-5-carboxylate reductase	-
AB691_RS20025 (AB691_4163)	-	4348166..4348756 (+)	591	WP_014598006.1	YggT family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 42566.88 Da
• Isoelectric Point: 6.8858

>NTDB_id=149033 AB691_RS20005 WP_019405534.1 4344326..4345471(-) (pilU) [Stutzerimonas stutzeri strain SLG510A3-8]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVSKTPMSPEMTRETVHGVMNEQQRREFTENHECNFAISARGIGR
FRVSAFYQRNLAGMVLRRIETNIPTIEELKLPDVLKKLSMTKRGLVLFVGATGTGKSTSLASMIGYRNKNSSGHIISIED
PIEFIHQHQNCIVTQREVGIDTSSFEVALKNTLRQAPDVILIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRI
INFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVHELKSLMKRSTELGMQTFDQA
LYNLYVQGEITYEDALLHADSANDLRLLIKLGSETDGEHLTSVSQGLSLEVSDEDPGRRFR

Nucleotide

• Length: 1146 bp

>NTDB_id=149033 AB691_RS20005 WP_019405534.1 4344326..4345471(-) (pilU) [Stutzerimonas stutzeri strain SLG510A3-8]
ATGGAATTCGAGAAACTTCTGCGCCTGATGGTCGAAAAAGGTGGCTCCGATCTGTTCATCACGGCTGGCGTGCCGCCGTC
GATGAAGGTCAACGGCAAGATCATGCCGGTGAGCAAGACGCCCATGTCGCCGGAGATGACCCGGGAAACCGTGCACGGCG
TGATGAACGAGCAGCAGCGCCGCGAGTTCACCGAGAACCACGAATGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGTGTCAGCGCGTTCTATCAGCGAAACCTGGCCGGCATGGTGCTGCGTCGCATCGAGACCAACATCCCGACCATCGA
AGAACTCAAGCTGCCGGACGTCCTGAAGAAGCTGTCGATGACCAAACGTGGTCTGGTGCTGTTCGTCGGCGCCACCGGTA
CCGGCAAGTCGACGTCGCTGGCCTCGATGATCGGCTACCGCAACAAGAACTCCAGCGGGCACATCATCTCCATCGAAGAC
CCGATCGAATTCATCCACCAGCACCAGAATTGCATCGTCACCCAGCGCGAAGTGGGCATCGACACCAGCTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCCTCATCGGCGAGATCCGTACCCGCGAAACCATGGATTACG
CGGTCGCCTTCGCCGAAACCGGCCACCTGTGCCTGGCCACGCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGCATC
ATCAACTTCTTCCCGCCGGACCGGCACAACCAGGTCTGGATGGACCTGTCGCTCAACCTCAAGGCCATCGTCGCCCAGCA
GCTGGTTCCGACCCCGGACGGCAAGGGTCGTCGTGCGGTCATCGAGGTGCTGATCAATACGCCGCTGGCGGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAATCGCTGATGAAGCGCTCCACCGAGCTGGGTATGCAGACCTTCGACCAGGCG
CTGTACAACCTCTACGTGCAGGGCGAGATCACCTACGAAGATGCCCTGCTGCATGCTGACTCGGCCAACGACCTGCGACT
GCTGATCAAGCTGGGTTCGGAAACCGACGGTGAGCACCTGACCAGCGTATCCCAGGGCCTGAGCCTGGAGGTCAGCGACG
AGGACCCGGGCCGGCGCTTCCGTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (113-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	95.013	100	0.95
pilU	Acinetobacter baylyi ADP1	66.106	93.701	0.619
pilU	Vibrio cholerae strain A1552	59.429	91.864	0.546
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.953	88.976	0.391