Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   REIFOR_RS14300 Genome accession   NZ_CP011797
Coordinates   3133554..3133934 (-) Length   126 a.a.
NCBI ID   WP_100258213.1    Uniprot ID   A0A2K8KTP5
Organism   Reinekea forsetii strain Hel1_31_D35     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3128554..3138934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  REIFOR_RS14280 (REIFOR_02867) - 3129546..3130394 (-) 849 WP_100258209.1 protein-glutamate O-methyltransferase CheR -
  REIFOR_RS14285 (REIFOR_02868) - 3130424..3132520 (-) 2097 WP_100258210.1 methyl-accepting chemotaxis protein -
  REIFOR_RS14290 (REIFOR_02869) - 3132588..3133124 (-) 537 WP_227003697.1 chemotaxis protein CheW -
  REIFOR_RS14295 (REIFOR_02870) pilH 3133130..3133507 (-) 378 WP_100258212.1 twitching motility response regulator PilH -
  REIFOR_RS14300 (REIFOR_02871) pilG 3133554..3133934 (-) 381 WP_100258213.1 twitching motility response regulator PilG Regulator
  REIFOR_RS14305 (REIFOR_02872) gshB 3134193..3135146 (+) 954 WP_100258214.1 glutathione synthase -
  REIFOR_RS14310 (REIFOR_02873) - 3135150..3136043 (+) 894 WP_100258215.1 energy transducer TonB -
  REIFOR_RS14315 (REIFOR_02874) ruvX 3136033..3136479 (+) 447 WP_100258216.1 Holliday junction resolvase RuvX -
  REIFOR_RS14320 (REIFOR_02875) - 3136476..3138098 (+) 1623 WP_100258217.1 VRR-NUC domain-containing protein -

Sequence


Protein


Download         Length: 126 a.a.        Molecular weight: 13970.26 Da        Isoelectric Point: 6.3444

>NTDB_id=148754 REIFOR_RS14300 WP_100258213.1 3133554..3133934(-) (pilG) [Reinekea forsetii strain Hel1_31_D35]
MDTSFENLKVMVIDDSKTIRRTAETLLKKVGCDVITATDGFDALAKIADSKPDIIFVDIMMPRLDGYQTCALIKNNSAFK
ETPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFGKEELLGAIRDYVK

Nucleotide


Download         Length: 381 bp        

>NTDB_id=148754 REIFOR_RS14300 WP_100258213.1 3133554..3133934(-) (pilG) [Reinekea forsetii strain Hel1_31_D35]
ATGGATACGAGTTTTGAAAATCTGAAAGTCATGGTGATTGACGACTCCAAGACAATTCGACGCACGGCAGAGACACTCCT
CAAAAAGGTCGGCTGTGATGTTATTACCGCCACGGATGGTTTTGATGCCCTCGCCAAAATCGCCGATTCAAAGCCAGATA
TAATCTTTGTGGATATTATGATGCCCCGCTTAGACGGTTATCAAACCTGCGCCCTAATTAAGAACAACAGCGCCTTTAAA
GAGACGCCGGTCATTATGCTGTCCAGTAAAGACGGACTGTTCGATAAGGCCAAAGGACGCATCGTCGGTAGTGACCAATA
TCTTACCAAGCCATTTGGTAAAGAAGAATTATTGGGTGCCATCCGCGACTATGTTAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2K8KTP5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

99.206

0.754

  vicR Streptococcus mutans UA159

41.525

93.651

0.389

  pilH Synechocystis sp. PCC 6803

40.171

92.857

0.373

  chpA Acinetobacter baumannii strain A118

38.983

93.651

0.365


Multiple sequence alignment