Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FORC16_RS12850 | Genome accession | NZ_CP011775 |
| Coordinates | 2820805..2821452 (+) | Length | 215 a.a. |
| NCBI ID | WP_011079388.1 | Uniprot ID | Q7MHB7 |
| Organism | Vibrio vulnificus strain FORC_016 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2815805..2826452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC16_RS12835 (FORC16_2529) | - | 2816343..2817803 (-) | 1461 | WP_060530670.1 | hypothetical protein | - |
| FORC16_RS12840 (FORC16_2530) | csrD | 2817816..2819813 (-) | 1998 | WP_043877331.1 | RNase E specificity factor CsrD | - |
| FORC16_RS12845 (FORC16_2531) | ssb | 2819966..2820505 (-) | 540 | WP_011079389.1 | single-stranded DNA-binding protein | Machinery gene |
| FORC16_RS12850 (FORC16_2532) | qstR | 2820805..2821452 (+) | 648 | WP_011079388.1 | response regulator transcription factor | Regulator |
| FORC16_RS12855 (FORC16_2533) | galU | 2821639..2822511 (+) | 873 | WP_011079387.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| FORC16_RS12860 (FORC16_2534) | uvrA | 2822654..2825476 (+) | 2823 | WP_060530668.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 215 a.a. Molecular weight: 24673.63 Da Isoelectric Point: 9.8565
>NTDB_id=148637 FORC16_RS12850 WP_011079388.1 2820805..2821452(+) (qstR) [Vibrio vulnificus strain FORC_016]
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
MRKSSYARKPFFISLQNEQTPEFVTVLAKQIQMEIPVITPATLMQADPNHRNRILLIDHQQHKVLLREIKNLPLIWKGFE
TVLCNVPSRLTTEELIGFGQCKAIFYRDTAITDMAKGLNSVINGKSWLPRDVSAQLIHYYRNMVCSHTSPVNVDLTMREI
QVLRCVQSGKSNSQIAEDLFISEFTVKSHLYQTFRKLSVKNRVQAAAWADQNLIS
Nucleotide
Download Length: 648 bp
>NTDB_id=148637 FORC16_RS12850 WP_011079388.1 2820805..2821452(+) (qstR) [Vibrio vulnificus strain FORC_016]
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAAATTAAAAACCTACCCCTGATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACCGCCATTACAGACATGGCCAAAGGACTAAATTCGGTGATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAGTCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
ATGAGAAAATCTTCTTACGCGCGGAAGCCATTTTTTATCAGTTTGCAAAACGAACAAACTCCTGAGTTCGTCACGGTATT
AGCTAAACAGATTCAAATGGAGATCCCTGTGATTACCCCGGCAACGCTCATGCAAGCCGATCCCAATCATCGTAATCGCA
TCTTATTGATTGATCATCAGCAACATAAGGTGCTGTTGAGAGAAATTAAAAACCTACCCCTGATATGGAAAGGGTTTGAA
ACGGTCCTGTGTAATGTACCTAGCCGATTGACGACTGAGGAACTGATCGGTTTTGGCCAGTGCAAAGCGATCTTCTACCG
AGACACCGCCATTACAGACATGGCCAAAGGACTAAATTCGGTGATTAATGGCAAAAGCTGGCTGCCACGCGACGTCAGCG
CACAACTCATCCACTACTATCGAAATATGGTTTGTTCACACACTTCACCAGTGAATGTGGATCTCACGATGAGAGAAATT
CAAGTGTTACGCTGCGTGCAGTCTGGCAAGTCAAATTCTCAAATCGCCGAAGATCTTTTCATTAGTGAATTCACCGTAAA
GTCGCATCTCTATCAAACCTTTAGAAAGCTCTCCGTGAAGAATCGTGTCCAAGCTGCCGCGTGGGCTGACCAAAATTTGA
TCTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
60.93 |
100 |
0.609 |
| qstR | Vibrio campbellii strain DS40M4 |
60.93 |
100 |
0.609 |
| qstR | Vibrio cholerae strain A1552 |
47.196 |
99.535 |
0.47 |