Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   ASU2_RS09750 Genome accession   NC_018690
Coordinates   2097055..2098209 (+) Length   384 a.a.
NCBI ID   WP_015674213.1    Uniprot ID   K0G6Q5
Organism   Actinobacillus suis H91-0380     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2092055..2103209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ASU2_RS09715 (ASU2_09530) - 2092461..2092745 (+) 285 WP_015674207.1 putative quinol monooxygenase -
  ASU2_RS09720 (ASU2_09535) - 2092912..2093544 (+) 633 WP_015674208.1 tellurite resistance TerB family protein -
  ASU2_RS09725 (ASU2_09540) - 2093685..2093975 (+) 291 WP_005621765.1 YfcZ/YiiS family protein -
  ASU2_RS09730 (ASU2_09545) - 2094064..2094393 (+) 330 WP_015674209.1 DMT family transporter -
  ASU2_RS09735 (ASU2_09550) - 2094472..2094966 (-) 495 WP_015674210.1 hemerythrin domain-containing protein -
  ASU2_RS09740 (ASU2_09555) rfaD 2095292..2096218 (-) 927 WP_015674211.1 ADP-glyceromanno-heptose 6-epimerase -
  ASU2_RS09745 (ASU2_09560) def 2096358..2096871 (-) 514 Protein_1900 peptide deformylase -
  ASU2_RS09750 (ASU2_09565) dprA 2097055..2098209 (+) 1155 WP_015674213.1 DNA-processing protein DprA Machinery gene
  ASU2_RS09755 (ASU2_09570) - 2098254..2100260 (-) 2007 WP_015674214.1 OPT family oligopeptide transporter -
  ASU2_RS09760 (ASU2_09575) - 2100479..2101834 (-) 1356 WP_015674215.1 PTS ascorbate transporter subunit IIC -
  ASU2_RS09765 (ASU2_09580) - 2101843..2102115 (-) 273 WP_015674216.1 PTS sugar transporter subunit IIB -
  ASU2_RS09770 (ASU2_09585) secE 2102423..2102836 (+) 414 WP_015674217.1 preprotein translocase subunit SecE -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42929.22 Da        Isoelectric Point: 6.1054

>NTDB_id=1466 ASU2_RS09750 WP_015674213.1 2097055..2098209(+) (dprA) [Actinobacillus suis H91-0380]
MSQTDLLKLLQIPQLGAQRIARLLSEVDFAQFCQYDKRQLQQIGWNEKQIQRWFNPEKRWIESALAWAEQPNQRLLTLFD
EEYPFLLRQISTAPPVLFVRGSISSLSLPQIAIVGSRDFSAYGEYWAGYFSEQLIKHHLAVTSGLAIGIDGFCHQRAVAE
QGITIAVLGSGLDQVYPARHKKLAEQIVESGGALVSEFFPNHPPLAENFPRRNRIISGLSLGTLVVEATVNSGSLITARY
ALEQGREVFALPNSVQNPYAQGCHKLIKEGAVLTETIEDILQAIQYQLPDQPRQQALFETEQAVEKTQFFAKANMPNKVN
HFAKKLPEMTACQQQIVEHIGLNPISIDDLAKATALEVETLLVELLGLELLSVIKQVSGGYVRQ

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=1466 ASU2_RS09750 WP_015674213.1 2097055..2098209(+) (dprA) [Actinobacillus suis H91-0380]
ATGTCACAGACTGATTTACTGAAATTATTACAAATCCCGCAATTGGGGGCGCAGCGAATTGCTCGCCTGTTATCCGAAGT
AGATTTCGCCCAATTTTGCCAATATGACAAGCGCCAATTACAACAAATCGGTTGGAACGAAAAACAAATTCAACGCTGGT
TCAATCCGGAAAAGCGTTGGATTGAGAGTGCATTGGCGTGGGCGGAGCAACCGAATCAACGTTTATTGACCTTATTTGAT
GAGGAATATCCGTTTTTATTACGGCAAATTAGCACCGCACCGCCGGTGTTATTTGTGCGAGGTTCGATAAGTAGTTTGAG
CTTACCGCAAATTGCGATTGTCGGTAGCCGAGATTTTTCCGCCTACGGAGAATACTGGGCGGGCTATTTTAGCGAGCAAC
TGATTAAACATCATTTGGCGGTAACCAGCGGACTCGCGATCGGTATAGACGGCTTTTGTCATCAGCGAGCGGTAGCGGAA
CAGGGTATTACGATTGCTGTGTTGGGCAGCGGTTTAGATCAAGTGTATCCGGCAAGACATAAAAAATTGGCGGAACAGAT
TGTCGAAAGCGGTGGGGCGTTAGTATCGGAATTTTTTCCGAATCACCCGCCGCTTGCCGAGAATTTCCCGCGTCGTAATC
GAATTATCAGCGGCTTATCACTCGGTACATTAGTGGTGGAAGCCACGGTGAATAGCGGTTCACTGATTACCGCGCGCTAT
GCGTTGGAACAAGGGCGAGAAGTTTTTGCGCTCCCCAATTCGGTACAAAATCCGTATGCACAAGGCTGTCATAAACTGAT
CAAAGAAGGGGCGGTCTTAACCGAAACGATAGAGGATATTTTACAAGCGATTCAATATCAACTGCCGGATCAGCCTCGGC
AACAGGCGTTATTTGAAACGGAACAAGCGGTCGAAAAAACACAATTTTTTGCAAAAGCCAATATGCCAAATAAGGTAAAT
CATTTTGCAAAAAAATTGCCGGAAATGACCGCTTGTCAGCAACAAATTGTGGAACATATCGGTCTTAATCCGATTTCGAT
TGATGATTTAGCGAAAGCGACCGCATTGGAGGTGGAAACGCTATTAGTTGAGTTACTGGGTTTGGAATTATTAAGTGTGA
TTAAGCAGGTGAGTGGCGGTTATGTCAGACAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K0G6Q5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Glaesserella parasuis strain SC1401

74.541

99.219

0.74

  dprA Vibrio campbellii strain DS40M4

45.646

98.698

0.451

  dprA Haemophilus influenzae Rd KW20

48.703

90.365

0.44

  dprA Vibrio cholerae strain A1552

42.239

100

0.432

  dprA Legionella pneumophila strain ERS1305867

37.337

99.74

0.372


Multiple sequence alignment