Detailed information NTG0146179

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: IMCC21906_RS14095
• Genome accession: NZ_CP011477
• Coordinates: 3061579..3062646 (-)
• Length: 355 a.a.
• NCBI ID: WP_047012705.1
• Uniprot ID: A0A0F7M8S8
• Organism: Spongiibacter sp. IMCC21906
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3056579..3067646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IMCC21906_RS14070 (IMCC21906_02856)	aroK	3057104..3057640 (-)	537	WP_082117488.1	shikimate kinase AroK	-
IMCC21906_RS14075 (IMCC21906_02857)	pilQ	3057648..3059834 (-)	2187	WP_231580276.1	type IV pilus secretin PilQ family protein	-
IMCC21906_RS14080 (IMCC21906_02858)	-	3059851..3060387 (-)	537	WP_047012702.1	pilus assembly protein PilP	-
IMCC21906_RS14085 (IMCC21906_02859)	-	3060384..3061001 (-)	618	WP_047012703.1	type 4a pilus biogenesis protein PilO	-
IMCC21906_RS14090 (IMCC21906_02860)	-	3061013..3061579 (-)	567	WP_047012704.1	PilN domain-containing protein	-
IMCC21906_RS14095 (IMCC21906_02861)	pilM	3061579..3062646 (-)	1068	WP_047012705.1	pilus assembly protein PilM	Machinery gene
IMCC21906_RS14100 (IMCC21906_02862)	-	3062816..3065272 (+)	2457	WP_052763549.1	penicillin-binding protein 1A	-
IMCC21906_RS14105 (IMCC21906_02863)	radA	3065328..3066692 (-)	1365	WP_047012706.1	DNA repair protein RadA	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38031.35 Da
• Isoelectric Point: 4.1047

>NTDB_id=146179 IMCC21906_RS14095 WP_047012705.1 3061579..3062646(-) (pilM) [Spongiibacter sp. IMCC21906]
MLKGLIGGNSSRSLLGVDISSSAVKLLELSRSGNTYRVESYAVMSLPPQSVVEKNIAEVEVVAEVLRAVVSRSRSKLKRA
AVAVPGSAVITKVLRMPADMNENTLETQISLEADQYIPYPLDEVALDFEIMGQADDNPEQMDVLLVACRRDNVDLRTEAL
EIAGLEAKLVDVEAFAVERSFELIASSLGCDENTVVAIVDIGASMTSLSVIVDGETLYTRDQLFGGRQLIEEIQRRYGMT
VEEAGLAKKQGGLSDDYDSEVLAPFKEAVIQQVARSLQFFYSSSQYNSVDMILLAGGVAAMQGLADIVESELGVSTVVAN
PFGSMAVAPGVDAMSLSNDAPAMLISCGLALRSFD

Nucleotide

• Length: 1068 bp

>NTDB_id=146179 IMCC21906_RS14095 WP_047012705.1 3061579..3062646(-) (pilM) [Spongiibacter sp. IMCC21906]
GTGCTAAAAGGCCTGATTGGCGGTAATTCGTCCCGAAGTCTTCTCGGTGTCGACATCAGTTCCAGTGCGGTGAAACTGCT
GGAGTTGAGTCGCAGTGGAAATACCTATCGCGTTGAGAGCTACGCGGTAATGTCTTTGCCACCTCAATCGGTGGTGGAGA
AGAACATTGCCGAAGTCGAGGTGGTAGCCGAGGTGCTGCGGGCTGTTGTGTCTCGATCTCGCAGTAAATTGAAGCGGGCC
GCAGTGGCGGTTCCCGGGTCGGCGGTGATTACCAAAGTCTTGCGGATGCCCGCAGACATGAATGAAAACACGCTGGAAAC
GCAAATTTCTCTCGAAGCTGATCAATATATCCCCTATCCCTTGGATGAAGTTGCGCTAGATTTTGAAATTATGGGGCAGG
CGGATGACAACCCTGAGCAAATGGATGTGCTACTGGTAGCTTGTCGACGTGACAATGTTGATTTGCGGACTGAAGCGCTG
GAAATTGCAGGCTTGGAAGCCAAGCTAGTGGATGTCGAAGCCTTTGCCGTTGAACGAAGCTTTGAGTTGATCGCCAGCTC
CTTGGGATGTGATGAAAACACCGTGGTGGCGATTGTCGATATCGGTGCCAGCATGACGTCGCTCAGTGTGATTGTAGACG
GTGAAACCCTGTATACCCGAGATCAGCTCTTTGGTGGCCGCCAGTTGATCGAAGAGATTCAGCGCCGTTATGGCATGACG
GTTGAAGAAGCGGGCTTGGCCAAAAAGCAAGGTGGCCTATCCGACGACTATGACAGCGAAGTCTTGGCTCCGTTCAAAGA
AGCGGTTATTCAGCAGGTGGCCAGGTCTTTGCAGTTTTTTTACTCATCAAGCCAATACAACTCCGTGGATATGATTTTGT
TGGCGGGCGGTGTGGCTGCCATGCAAGGTTTGGCCGATATTGTTGAGTCGGAGCTGGGGGTCAGCACGGTAGTGGCAAAT
CCTTTTGGGTCTATGGCAGTGGCTCCTGGTGTCGATGCAATGAGCTTAAGCAATGATGCACCGGCAATGCTTATTTCCTG
TGGATTGGCATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (16-354)

3D structure

• AlphaFold DB: A0A0F7M8S8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.623	97.183	0.521
comM	Acinetobacter nosocomialis M2	53.623	97.183	0.521
comM	Acinetobacter baylyi ADP1	51.304	97.183	0.499
pilM	Legionella pneumophila strain ERS1305867	45.821	97.746	0.448