Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   IMCC21906_RS01165 Genome accession   NZ_CP011477
Coordinates   262821..263207 (-) Length   128 a.a.
NCBI ID   WP_047010631.1    Uniprot ID   A0A0F7M0S6
Organism   Spongiibacter sp. IMCC21906     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 257821..268207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMCC21906_RS01150 (IMCC21906_00233) - 259701..261734 (-) 2034 WP_052763296.1 methyl-accepting chemotaxis protein -
  IMCC21906_RS01155 (IMCC21906_00234) - 261813..262349 (-) 537 WP_047010629.1 chemotaxis protein CheW -
  IMCC21906_RS01160 (IMCC21906_00235) - 262357..262719 (-) 363 WP_047010630.1 PleD family two-component system response regulator -
  IMCC21906_RS01165 (IMCC21906_00236) pilG 262821..263207 (-) 387 WP_047010631.1 twitching motility response regulator PilG Regulator
  IMCC21906_RS01170 (IMCC21906_00237) gshB 263492..264457 (+) 966 WP_047010632.1 glutathione synthase -
  IMCC21906_RS01175 (IMCC21906_00238) - 264457..265353 (+) 897 WP_047010633.1 energy transducer TonB -
  IMCC21906_RS01180 (IMCC21906_00239) - 265518..266084 (+) 567 WP_047010634.1 YqgE/AlgH family protein -
  IMCC21906_RS01185 (IMCC21906_00240) ruvX 266097..266534 (+) 438 WP_047013027.1 Holliday junction resolvase RuvX -
  IMCC21906_RS01190 (IMCC21906_00241) pilU 266543..267712 (-) 1170 WP_047010635.1 PilT/PilU family type 4a pilus ATPase Machinery gene

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14057.34 Da        Isoelectric Point: 6.4585

>NTDB_id=146156 IMCC21906_RS01165 WP_047010631.1 262821..263207(-) (pilG) [Spongiibacter sp. IMCC21906]
MDADFSNLKVMIIDDSKTIRRTTETLLAKEGCTVVTAIDGFDALAKIADTKPHIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKSELLDAISVHVSLA

Nucleotide


Download         Length: 387 bp        

>NTDB_id=146156 IMCC21906_RS01165 WP_047010631.1 262821..263207(-) (pilG) [Spongiibacter sp. IMCC21906]
ATGGATGCCGATTTCTCCAATCTGAAAGTGATGATTATTGACGATAGCAAAACAATTCGTCGCACCACAGAAACCCTGTT
GGCTAAAGAGGGCTGTACGGTGGTGACAGCCATTGATGGCTTTGATGCTCTCGCCAAAATTGCCGATACCAAGCCCCATA
TTATCTTTGTCGATATTATGATGCCTCGTTTGGACGGTTACCAAACCTGTGCACTAATCAAAAATAACAGTGAGTTTAAA
TCGACTCCCGTCATCATGCTGTCTAGCAAAGATGGTCTCTTTGATAAAGCGAAGGGGCGCATTGTCGGGTCAGATCAATA
TTTGACCAAGCCGTTTAGTAAGTCCGAACTGCTCGATGCCATTAGTGTGCACGTTTCACTTGCGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0F7M0S6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.603

98.438

0.734
  vicR Streptococcus mutans UA159

43.59

91.406

0.398
  micA Streptococcus pneumoniae Cp1015

43.119

85.156

0.367

Multiple sequence alignment