Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | XI92_RS14660 | Genome accession | NZ_CP011349 |
| Coordinates | 2799756..2800268 (+) | Length | 170 a.a. |
| NCBI ID | WP_000981966.1 | Uniprot ID | A0A0A3WKS9 |
| Organism | Bacillus thuringiensis strain YC-10 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2794756..2805268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XI92_RS14630 (XI92_14630) | spo0J | 2795204..2796055 (+) | 852 | WP_001051829.1 | stage 0 sporulation protein Spo0J | - |
| XI92_RS14635 (XI92_14635) | yyaC | 2796076..2796672 (-) | 597 | WP_001020715.1 | spore protease YyaC | - |
| XI92_RS14640 (XI92_14640) | - | 2796932..2797813 (+) | 882 | WP_000365108.1 | mechanosensitive ion channel family protein | - |
| XI92_RS14645 (XI92_14645) | - | 2797834..2798031 (+) | 198 | WP_000435485.1 | DUF951 domain-containing protein | - |
| XI92_RS14650 (XI92_14650) | ychF | 2798147..2799247 (+) | 1101 | WP_000524667.1 | redox-regulated ATPase YchF | - |
| XI92_RS14655 (XI92_14655) | rpsF | 2799439..2799729 (+) | 291 | WP_001233778.1 | 30S ribosomal protein S6 | - |
| XI92_RS14660 (XI92_14660) | ssbA | 2799756..2800268 (+) | 513 | WP_000981966.1 | single-stranded DNA-binding protein | Machinery gene |
| XI92_RS14665 (XI92_14665) | rpsR | 2800314..2800547 (+) | 234 | WP_000918873.1 | 30S ribosomal protein S18 | - |
| XI92_RS14670 (XI92_14670) | - | 2800628..2801587 (+) | 960 | WP_047225407.1 | YybS family protein | - |
| XI92_RS14675 (XI92_14675) | - | 2801641..2803614 (+) | 1974 | WP_001113788.1 | DHH family phosphoesterase | - |
| XI92_RS14680 (XI92_14680) | rplI | 2803611..2804057 (+) | 447 | WP_000864228.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18494.29 Da Isoelectric Point: 4.9327
>NTDB_id=144995 XI92_RS14660 WP_000981966.1 2799756..2800268(+) (ssbA) [Bacillus thuringiensis strain YC-10]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=144995 XI92_RS14660 WP_000981966.1 2799756..2800268(+) (ssbA) [Bacillus thuringiensis strain YC-10]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAACCAAGGTAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.571 |
100 |
0.747 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
62.353 |
0.406 |
| ssb | Glaesserella parasuis strain SC1401 |
37.43 |
100 |
0.394 |