Detailed information NTG0144802

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: AXE82_RS03080
• Genome accession: NZ_CP014234
• Coordinates: 709791..710774 (-)
• Length: 327 a.a.
• NCBI ID: WP_062331309.1
• Uniprot ID: A0A9X1URZ2
• Organism: Moraxella osloensis strain CCUG 350
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 704791..715774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXE82_RS03070 (AXE82_03070)	-	705872..707161 (-)	1290	WP_062331302.1	hypothetical protein	-
AXE82_RS03075 (AXE82_03075)	-	707644..709725 (+)	2082	WP_062331305.1	hypothetical protein	-
AXE82_RS03080 (AXE82_03080)	ruvB	709791..710774 (-)	984	WP_062331309.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
AXE82_RS03085 (AXE82_03085)	-	710869..711321 (-)	453	WP_227713340.1	hypothetical protein	-
AXE82_RS03090 (AXE82_03090)	gcvT	712199..713332 (+)	1134	WP_062334729.1	glycine cleavage system aminomethyltransferase GcvT	-
AXE82_RS03095 (AXE82_03095)	-	713447..713833 (+)	387	WP_062331316.1	MliC family protein	-
AXE82_RS03100 (AXE82_03100)	gcvH	714111..714491 (+)	381	WP_062331319.1	glycine cleavage system protein GcvH	-
AXE82_RS03105 (AXE82_03105)	-	714624..715358 (+)	735	WP_062331322.1	nitroreductase family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35890.24 Da
• Isoelectric Point: 5.1309

>NTDB_id=144802 AXE82_RS03080 WP_062331309.1 709791..710774(-) (ruvB) [Moraxella osloensis strain CCUG 350]
MIPPFSSANSQQRLISPMGRSEDQNDNNIRPALLAEYIGQPVVKEQMGVFINAALSRKEALDHTLIFGPPGLGKTTLANI
IAREMGGNLRSTSGPVLERAGDLAAMLTNLEPGDVLFIDEIHRLSPMIEEILYPAMEDFQLDIMIGEGPAARSIKLDLPP
FTLVAATTRAGLLTSPLRDRFGIVQRLEFYNVEDLTTIVTRSAGLLNVPMTKEGAVEVARRSRGTPRIANRLLRRVRDYA
QVKGDGTVTAEIAHSALDMLAVDKRGLDNLDRRYLEMLEERFNGGPAGVESIAAALAEDRGTLEDVIEPYLIQQGYIVRT
ARGRMLT

Nucleotide

• Length: 984 bp

>NTDB_id=144802 AXE82_RS03080 WP_062331309.1 709791..710774(-) (ruvB) [Moraxella osloensis strain CCUG 350]
ATGATTCCACCTTTTTCAAGTGCCAATTCTCAGCAACGTCTGATTAGTCCGATGGGGCGCTCAGAAGACCAAAATGACAA
TAATATCCGTCCAGCCTTACTCGCTGAATATATCGGTCAGCCTGTGGTCAAAGAACAAATGGGCGTGTTTATTAACGCGG
CATTATCGAGAAAAGAAGCGCTCGACCATACATTGATATTTGGACCGCCTGGACTGGGTAAAACCACACTCGCCAACATT
ATCGCCCGTGAGATGGGCGGTAATCTGCGCTCAACGTCTGGTCCTGTGCTTGAACGCGCGGGTGATTTGGCAGCGATGCT
GACAAATTTAGAGCCTGGTGATGTGCTGTTTATTGATGAGATTCACCGTTTAAGCCCGATGATTGAAGAAATTTTGTATC
CTGCGATGGAAGATTTTCAGCTGGATATTATGATTGGCGAAGGACCTGCTGCACGCTCCATAAAGCTTGATTTGCCGCCT
TTTACTTTGGTGGCTGCGACCACGCGAGCAGGTTTGTTGACCTCGCCACTGCGTGACCGTTTTGGTATTGTACAGCGATT
AGAGTTTTATAATGTGGAGGACTTAACGACCATTGTCACAAGATCGGCTGGATTGCTTAACGTGCCTATGACCAAAGAAG
GGGCAGTCGAAGTCGCTAGACGTTCGCGCGGTACACCGCGTATTGCCAATCGGTTGCTACGCCGCGTACGTGATTATGCC
CAAGTTAAAGGCGATGGCACCGTCACCGCTGAAATTGCGCATAGCGCACTCGATATGCTGGCAGTTGATAAACGCGGGCT
TGATAATCTTGACAGACGTTATCTTGAGATGTTAGAAGAGCGTTTTAATGGCGGACCTGCGGGAGTTGAGTCGATTGCAG
CCGCACTCGCTGAAGATAGAGGCACGCTTGAAGATGTGATTGAGCCGTATCTGATTCAGCAAGGTTATATCGTACGCACT
GCACGGGGGCGGATGTTGACTTAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (190-263)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (29-187)

• RuvB C-terminal winged helix domain (WHD_RuvB) (265-327)

3D structure

• AlphaFold DB: A0A9X1URZ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Bacillus subtilis subsp. subtilis str. 168	61.514	96.942	0.596
ruvB	Streptococcus pneumoniae TIGR4	56.688	96.024	0.544
ruvB	Synechocystis sp. PCC 6803	55.521	96.942	0.538
ruvB	Streptococcus pneumoniae R6	57.516	93.578	0.538
ruvB	Streptococcus pneumoniae D39	57.516	93.578	0.538
ruvB	Helicobacter pylori 26695	55.333	91.743	0.508