Detailed information NTG0144150

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: XM40_RS16285
• Genome accession: NZ_CP011278
• Coordinates: 3374039..3375202 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain L-S60
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3369039..3380202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XM40_RS16255 (XM40_16255)	-	3369304..3369723 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
XM40_RS16260 (XM40_16260)	comFC	3369797..3370486 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
XM40_RS16265 (XM40_16265)	-	3370492..3370776 (-)	285	WP_003151389.1	competence protein ComFB	-
XM40_RS16270 (XM40_16270)	comFA	3370834..3372219 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
XM40_RS16275 (XM40_16275)	-	3372327..3373175 (-)	849	WP_043867471.1	DegV family protein	-
XM40_RS16280 (XM40_16280)	degU	3373273..3373962 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
XM40_RS16285 (XM40_16285)	degS	3374039..3375202 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
XM40_RS16290 (XM40_16290)	-	3375425..3376072 (+)	648	WP_043867472.1	YigZ family protein	-
XM40_RS16295 (XM40_16295)	-	3376077..3377291 (+)	1215	WP_043867473.1	LCP family protein	-
XM40_RS16300 (XM40_16300)	-	3377381..3378457 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
XM40_RS16305 (XM40_16305)	-	3378590..3379786 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=144150 XM40_RS16285 WP_003151385.1 3374039..3375202(-) (degS) [Bacillus velezensis strain L-S60]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=144150 XM40_RS16285 WP_003151385.1 3374039..3375202(-) (degS) [Bacillus velezensis strain L-S60]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948